KEGG   Citrus sinensis (Valencia orange): 102625108
Entry
102625108         CDS       T02983                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102625108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102625108
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102625108
Membrane trafficking [BR:cit04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    102625108
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102625108
  Exosomal proteins of other body fluids (saliva and urine)
   102625108
  Exosomal proteins of colorectal cancer cells
   102625108
  Exosomal proteins of bladder cancer cells
   102625108
SSDB
Motif
Pfam: VPS28 DAHL GDH_C Chorion_S16
Other DBs
NCBI-GeneID: 102625108
NCBI-ProteinID: XP_024951175
Position
2:complement(29458256..29458885)
AA seq 209 aa
MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLS
STLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRAAAVASTTTSAAIVAECVQN
FITAMDSLKLNMVAVDQVHPLLSDLLGSLNKLTILPPDFEGKTKMKDWISRLSKMGAADE
LTEQQSRQLHFDLESSYNSFMAALPNAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagctatggaacgacaagcgcgagagagaaatgtatgaaaactttgctgag
ctttatgctataataaaagccacagaaaagcttgaaaaagcatatgttcgtgatattatt
agttcctctgagtatgaaacagaatgtcaaaagctcattgcccattttaaaaccttatct
tcgaccttgaaagatattgttccgagcattgaacggtttgctgatacatataaaatggac
tgtccggctgctctgaatcgcttggtcacctctggggtgcctgctacggtggagcataga
gcggctgcagttgcctcaaccaccacctctgctgccattgtggcagagtgtgtccagaac
tttattactgccatggactctttaaaattgaatatggtggcagttgatcaggtgcatccg
ctgttatcagatttgctgggttcactcaataagctgactattctgccaccggattttgag
gggaaaacaaaaatgaaggactggatttcaaggttgtcaaagatgggtgctgcagatgag
ttgaccgagcagcagtcccggcaacttcactttgaccttgaatcctcatacaactcattc
atggcagctcttcctaatgctggtacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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