KEGG   Citrus sinensis (Valencia orange): 102627301
Entry
102627301         CDS       T02983                                 
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
  KO
K14857  AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102627301
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    102627301
SSDB
Motif
Pfam: Spb1_C FtsJ DUF3381 ANIS5_cation-bd
Other DBs
NCBI-GeneID: 102627301
NCBI-ProteinID: XP_006487209
Position
8:complement(join(5408997..5409998,5410855..5410981,5411069..5411208,5411703..5411792,5412555..5412750,5412926..5412987,5413084..5413240,5413572..5413618,5413735..5413890,5414005..5414052,5414330..5414803))
AA seq 832 aa
MGKVKGKHRLDKYYRLAKEHGYRSRASWKLVQLDSKFSFLRSSHAVLDLCAAPGGWMQVA
VQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGS
PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE
VDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHR
DGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALCD
DLRVLGKQDFKHLLKWRMQIKKAFSSAEKATVPASASAPTEGENEEDADNRVLNEMEELK
YAMDQRKKREKKLLAKKRAKDKARRATGMQIDVMQDDYTDHELFSLSSIKGKKDLAAVEY
DDDDVNAAAEDSEDERPNRDTQEHVSSDIDSDEERRKYDEQLEEVLDQAYENYVAKRGGS
TMQRKRAKKAYAQEDQLSEGDEDEDTMHTSYDSDKDQGDLDANPLMVPLDDGIRPTQEEI
TNKWFSQEIFAEAVQNGDLGKLGSEDETQVDKQAEKHSIPEKSKQKMANDAAGPKSTHNQ
VSEVEGDFEIVPAPGADSSDDSSSDESEDEEVDTKAEILACAKKMLRKKQREQILDDVYN
RYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRV
AMRKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAKKGVQVRAGKG
KVLVDPRMKKDSRTHGSGKARKGGSKKGNIGKARKGKGSVKASSKKGKKGNK
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgggtaaagtaaaggggaagcatcgtttggataaatattaccgtttagcgaaagaacac
ggctacagatctcgagcttcatggaaactcgtccagctcgattccaaattctccttctta
cgctcatcgcacgccgtgctcgacctctgcgccgctccaggtgggtggatgcaggtggca
gtgcagcgggtcccggtagggagcctcgttctgggtcttgacttggtcccgatcgccccc
attcgaggagccgtatcgcttgagcaagatataacgaagcccgagtgtagggctagagtg
aagaaggtgatggaggagcatggggttagggcttttgacttggttttgcatgatgggtcg
cctaatgttggtggtgcttgggctcaggaggccatgagtcagaacgctttggtcattgat
tctgtaaagctggctacgcagttcttggctcctaaaggaacctttgttactaaagttttc
aggtcacaggattatagttctgtcctctactgtctcaagcagttatttgaaaaggttgag
gtggataaacctgctgctagtcgttccgcatctgctgagatatatcttttgggtataaaa
tacaaggctcctgcaaagatcgatccacgtcttcttgatgtgaagtatctgtttcaggga
tctgttgaaccgcgtaaggtggtggatgtactcagaggaacaaagcaaaagagacatcgt
gatggttatgaagatggagacacgactttgaggaaagtttctttggctactgatttcatt
tggtccaataatcctcttgagattcttggttcagttacttccataacatttggggatccg
gcttgttcagcaatcaaggatcacgaattgacaacagaagaggttaaagctctttgtgat
gatttgcgtgttttgggaaagcaagacttcaagcatctattgaagtggcgaatgcaaata
aagaaggccttttcttctgcagaaaaggctaccgtgcctgcttctgcttctgctcctact
gaaggcgaaaatgaggaggatgcagataacagagtactcaatgaaatggaggaattgaaa
tatgccatggatcagcgaaagaaacgtgaaaagaagcttctagcgaaaaaaagggctaag
gacaaggcacggagggcaactgggatgcaaatagacgttatgcaagatgattatactgat
cacgaattattttctctttcttccattaaggggaaaaaagatcttgctgctgttgaatat
gatgatgatgatgtgaatgctgctgctgaggacagtgaagacgaaagacccaatagagac
actcaagagcatgtgtccagtgacattgactctgatgaagaacgcagaaagtatgatgaa
caattggaggaggttcttgatcaagcttatgaaaactatgtggctaaaaggggaggaagt
acaatgcaacgaaaacgtgcgaaaaaagcctatgcccaagaggaccaactctcagagggt
gatgaggatgaagacactatgcatactagttatgattcagacaaagatcagggtgatcta
gatgcaaatcctctcatggtaccacttgatgatggtataaggccaacacaagaggaaatt
acaaataagtggtttagtcaggaaatttttgcggaagctgtacaaaatggagatttgggg
aaattgggcagtgaagatgaaacgcaggtggataaacaggcggaaaagcattctatccca
gaaaagtccaagcagaagatggcaaatgatgctgcaggtcctaagagcacgcacaaccaa
gtgtcagaggtggaaggtgattttgagatagtccctgctccaggcgcggattccagtgac
gactcatcctctgatgaatcagaagatgaagaggttgatacaaaagctgagatattggct
tgtgcaaagaagatgctaaggaaaaagcaaagggagcagattctggatgatgtttacaat
aggtacatgtttgatgatgatggcttgccagactggtttttagaagaggaaaggaggcat
cggcaagcaattaggcctgttaccaaggaggagattgctgcaatgaaagcacaattcaaa
gaaattgatgcccgacctgctaagaaggtggctgaggccaaagcccgaaagaagcgggtt
gccatgcgaaagcttgagaaggttcgcaagaaggcgaatgtcatatcagaccaagcagac
atctctgatcgctcaaagaggaagcaaattgaacaattatacaagtcagctgtacccaaa
aggcctaaaaaggaatatgtggttgcgaagaagggagttcaagtgagggctggaaagggg
aaggttcttgttgatccacgaatgaaaaaggattcaaggacacatggatctggcaaggcc
agaaaaggtggttcgaagaaggggaatattggcaaggcgcgcaaaggtaaaggatctgtg
aaggcttcgtcaaagaaaggaaagaaaggaaacaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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