KEGG   Citrus sinensis (Valencia orange): 102628005
Entry
102628005         CDS       T02983                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102628005
   03036 Chromosome and associated proteins [BR:cit03036]
    102628005
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102628005
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    102628005
SSDB
Motif
Pfam: DEAD GUCT Helicase_C ResIII FlpD CMS1
Other DBs
NCBI-GeneID: 102628005
NCBI-ProteinID: XP_006490269
UniProt: A0A067FDC6
Position
9:complement(join(3289627..3289859,3290050..3290183,3290725..3290819,3290941..3291037,3291119..3291287,3291385..3291445,3291524..3291625,3292056..3292167,3292281..3292435,3292580..3292650,3292738..3292849,3292999..3293139,3293226..3293360,3293582..3294052))
AA seq 695 aa
MPSIALFDGKEVKDEKKMNKKMALKDFEETEAALTEKSSDKKKSKKKESSKKRKESEIEE
EEERSETSSELGEPVNLKSEKEKKKKKKAKVEPEAGVEEQERGESEHPNAVSRFRISVPL
REKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASK
KTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDV
VIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLF
SATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCY
SSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAA
RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSSVSKIERESGVK
FEHISAPQPADIAKAAGVEAAETITQVSDSVIPAFKSAAEELLNNSGLSAAELLAKALAK
AVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTAD
GNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQEREQSRGRFGGGGRSGFGGRGG
NRFSGGRGGGFSDRRNDRFSGGFRGSKGRGGGNRW
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgccttcgatcgctttgtttgacggaaaagaagtgaaagacgagaagaagatgaataag
aaaatggctctcaaggacttcgaagaaacggaggcggcgttaactgagaagagttcggat
aagaagaagagcaagaagaaggagagtagtaagaagcggaaggaatcggagattgaggag
gaggaagagagaagcgaaacgagctcggagttaggcgagccggtgaatttgaaatcggag
aaggagaaaaagaagaagaagaaagcgaaagttgagcctgaggctggagtggaagagcag
gagaggggtgaaagcgaacatccgaatgcggtttcgaggtttagaatatcggtgccatta
agggaaaagctcaagtccaaggggattgagtctttgtttcctattcaagctatgactttt
gatatggttcttgatggctctgatttagtcggacgtgcacggaccggtcagggtaaaact
ttagcctttgtgttgccaattttagagtctctaacgaatgggccaacaaaagcgtccaag
aagactggatatggcagggctccaagtgttttggtacttttgcctactagggaattggcc
aaacaggttcatgaggactttgatgtctatggcggggcagtgggactgacctcatgttgc
ttatatggaggagctccttatcatgctcaggagtttaaattaaagaaagggattgatgta
gtcattggaacccctggacgtattaaggatcacattgagaggggcaatattgacttgagt
tcattgaagtttcgggtccttgatgaggctgatgagatgcttaggatgggtttcgttgaa
gatgttgaacttattctgggtaaagtcgaggatgctaataaagttcagacacttctcttc
agtgccaccttgccaagctgggtgaagcatatttccaccaagtttcttaaatcagacaag
aaaaccatagatcttgttggcaatgagaaaatgaaggctagtaccaatgtccggcatatt
gttcttccttgttctagttcagcgagatctcaagtcattcctgatatcattcgttgttat
agcagtggaggccgaactattattttcaccgagacaaaggaaagtgcttctcagcttgct
gacttgctgcctggtgcacgggctttacatggggacatacagcagtctcaacgtgaggtg
acacttgctgggttcaggtcaggaaagttcatgacattagttgccacaaatgtggcggca
cggggtttggacattaatgatgtgcagttaattattcagtgtgagcctcctcgtgatgta
gaagcctatatacatcgatctggacgtactggaagagcaggcaatactggagttgctgta
atgctttatgatcctagaaagtcaagtgtatctaagatagaaagagaatctggtgtgaaa
tttgagcacatatctgctccacagccagctgatattgccaaggctgcaggtgtggaagct
gctgaaacaataacccaagtttctgatagtgtaattcccgctttcaagtccgctgctgag
gagctgttgaataattctggtctatcagcagcagagctgcttgcaaaagcactagccaag
gctgtaggttatactgagataaagagtagatcacttcttagttctttggaggatcatgtt
acagtggttcttgaagcaggaaagcccatctacacaccatcctttgcttttggtgtcttg
agaagattcttgcctgaggaaaaagtagagttagtgaagggtatggctctgaccgctgat
ggaaatggtgcggtttttgatgtaccagtggcagatttggacttgtttcgatctggtgcg
gacaatgctgctaacgtcagcttggaagtgttgaaacaattgccacccttgcaagaaagg
gaacagtcaagaggaagatttggtggtggtggtcgtagtggctttggtggaagaggtggt
aacaggttttcaggtggcagaggtggtggattttctgataggagaaatgataggttctcc
ggtgggtttagaggtagtaagggtcgtggtggtggcaacagatggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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