KEGG   Citrus sinensis (Valencia orange): 102630337
Entry
102630337         CDS       T02983                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 8
  KO
K14649  transcription initiation factor TFIID subunit 8
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102630337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102630337
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102630337
SSDB
Motif
Pfam: TAF8_C Bromo_TP TFIID-31kDa CReP_N
Other DBs
NCBI-GeneID: 102630337
NCBI-ProteinID: XP_006495304
Position
6:9432139..9433251
AA seq 370 aa
MNHGGGESTSRSESRTDTSSDRPKAEDFSRAVSKMAVAQICESVGFQGFKDSALDALLDI
AIRYICDLGKTSSFQANLACRTECNLFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKE
IIDFVESKEEIPFAQPIPQYPVIRSRRLIPSFEEMNETPPGKHIPSWLPAFPDPHTYIYT
PMWNERKSDPRADKIELARQRRKAEMALLSLQQRLVCNGETGTSASRPANDEEELLKTGS
NPFFAKPLQSGEKDISPVGLPAKLKDKMSGGNHMSVMEAFAPAIEAVKVSGFSDDADGDR
RYLPEKRPAVHFKFRAGKKFLGEILDSSLQKKGGRRSASFWRDEEKDDKKRRAEFILKQS
IENPQELSQL
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaaccatggaggtggagagagcacatcaaggagcgaatccagaaccgacacgtcatca
gacagacctaaagccgaagactttagccgagcagtgtcgaaaatggcggttgcacagata
tgtgagagcgtgggctttcagggattcaaggactcggcattggacgcccttttggatatt
gcaattcgatacatctgtgacttaggtaaaacatccagctttcaagctaacttagcctgt
agaactgaatgtaatttgtttgatataattcgcggaatagaagatttagaagtgttaaag
gggtttatgggtgccgcagagattggtaaatgtcttgtgggttcggggatagttaaagaa
ataattgactttgtggagtcgaaggaggaaatcccctttgcacagccaatcccacaatat
cctgttattaggagtcggagattgataccgagttttgaagaaatgaatgaaacaccacct
gggaagcatattccatcttggttgccagcttttcccgatcctcatacgtatatatataca
cctatgtggaatgagaggaagtcggatcctcgtgctgataagattgaactagcgaggcaa
aggagaaaggcagagatggctttgttgagtttgcagcagaggttggtgtgcaatggtgaa
accggaacttcagcctcaaggcctgcaaatgatgaggaagagctactcaaaactggtagt
aaccccttttttgcaaagccattgcaatctggagagaaagatatatctccagttggcttg
ccagctaagcttaaagataaaatgtctggggggaaccatatgtctgtgatggaggcattt
gctcctgctattgaagcagtgaaagttagtggatttagtgatgatgcagatggtgatagg
aggtatcttcccgagaagaggccagctgttcattttaaatttagagctggcaagaaattt
ttgggtgaaattttggattcaagtcttcagaagaagggtggtagaagaagtgcatcattt
tggcgggatgaggagaaggatgacaagaagagaagagctgagttcattcttaaacaatct
atagaaaatccacaagaactctctcagttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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