KEGG   Citrus sinensis (Valencia orange): 112497606
Entry
112497606         CDS       T02983                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit00900  Terpenoid backbone biosynthesis
cit01100  Metabolic pathways
cit01110  Biosynthesis of secondary metabolites
Module
cit_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:cit00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    112497606
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cit01006]
    112497606
Enzymes [BR:cit01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     112497606
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     112497606
    2.5.1.29  geranylgeranyl diphosphate synthase
     112497606
Prenyltransferases [BR:cit01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   112497606
SSDB
Motif
Pfam: polyprenyl_synt ORF6C
Other DBs
NCBI-GeneID: 112497606
NCBI-ProteinID: XP_024952306
Position
5:complement(7878061..7879110)
AA seq 349 aa
MTSSDLFWNSINALKHHSVMPYVPNSHVAKSVLLRGQPKKLKIINSQRNDTLPKFFQVNE
YKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMS
MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII
KAKNVSPDRLLRAMVEINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA
SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKATY
PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNNN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgacctcatcagatctattttggaactccattaatgccctcaaacaccactcagtgatg
ccatatgttcctaattcgcacgttgccaaatcagtactgctgagagggcaacccaaaaaa
ctgaagattattaattcacaacgaaacgacactttgcccaagtttttccaagttaacgaa
tacaaggccttgaaagcaaagcaaatcaacgaggctttagatgaggcagttccacttcca
catcctgctattcttcatgaagcaatgcgatactctctacctggtggtaaacgtttaatg
tcaactttatgtattgcttcatgtgagatgatcggaggaagtcagtcagtggcgatgtca
atggcttgtgctatagagttgctcgtcacaatggctgtaattcaagatgacctgccatgc
cttgacaacgatgatcttcgacgaggcaagccctcaaaccacaaggttttcggcgaagca
acggcaattcttgcttgtcaagctctgcactgccttgccatgcagcacattgccataatc
aaggccaaaaacgtttcgcccgaccgcctgcttcgggccatggttgagataaactcagct
gttgggtcagaaggaattgctgcagggcagatcatggacatcaacagtgaaggcaaagaa
gtaagtttgagtgaattgaacttcattcatagacacaaaactgggaagtttatagaggca
agcatagttagcggagttataatcggaggaggaaatgaagaagagatagagagaatgagg
aattttggaaaatacgtagggatggcatatcaattatggaatgatattgtagatgtaatt
ggatcgccagagatgagggaaaagactggcagggatatgatgcgagataaggcaacatat
ccaaagttagtggggatcgatgggtccaagaagcatgccaaggagctgatagctgaagca
aaacaagagcttgcttactttgatcctacaagggctgcccccctagaccatctggttaac
ttcatcgtttcctttggcaataataattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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