KEGG   Clostridium innocuum: G4D55_13015
Entry
G4D55_13015       CDS       T06525                                 
Symbol
alr
Name
(GenBank) alanine racemase
  KO
K18348  serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
Organism
ciu  Clostridium innocuum
Pathway
ciu01502  Vancomycin resistance
ciu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G4D55_13015 (alr)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    G4D55_13015 (alr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ciu01504]
    G4D55_13015 (alr)
Enzymes [BR:ciu01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     G4D55_13015 (alr)
    5.1.1.18  serine racemase
     G4D55_13015 (alr)
Antimicrobial resistance genes [BR:ciu01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Ser type [MD:M00652]
    G4D55_13015 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mak10
Other DBs
NCBI-ProteinID: QIX09945
Position
complement(2689043..2690209)
AA seq 388 aa
MKKVENVLKSNTRSWLEIDLNRISHNIKEVQKLIPSTSKIMAIVKANGYGHGDVECSRMM
EQQGIDFFGVSSVDEGVRLRENGIQSPILVLGYTPPVHFHYLNEASLIQTLVSKEYAEKL
NAYAKEQNVVVKAHAKVDTGMSRIGIIAQDHAYHIEDIKALYRLEYLDVCGIFSHFSVSD
CLDEENCAFTNHQIALFERVLADLRAEGIDPGTTHLQNSYGILNYPNLHYDYVRPGLLWM
GVTSDDALAIRTAPQFQPIMEWKANVSLVKDIQPGVTVSYGRHFKAEVCTRVATLAVGYA
DGFPRSVSNQGACVLLHGRRVPIIGNICMDQMMVDITGLDGVSEGDVATLIGCDGDEVLS
VDELSRLAHTINNETLCWISQRVPRIYK
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaagaaggtggaaaatgtgctgaagagcaatacgcgttcctggctggaaattgatctg
aacaggatctcacataacataaaggaagtacagaagctgattccctctacaagcaagatt
atggcaatcgtcaaagcgaacggctatgggcacggcgatgtggaatgctcccgaatgatg
gaacagcaggggattgacttttttggagtaagcagtgttgacgaaggcgttcgactgcgt
gaaaacggcatccaaagtccgattctggtgctggggtatacgccgcctgttcattttcat
tatctgaatgaggcttccctgatccagacgctggtatcaaaggagtatgcagaaaagctg
aacgcatatgctaaagagcagaatgttgttgtcaaagcacatgccaaggtggataccggt
atgtccagaatcggtattattgcacaggatcatgcatatcatatcgaggatatcaaagcg
ctgtaccgtctggagtatctggatgtctgcggtattttctcccacttcagtgtcagtgac
tgtctggatgaggaaaattgtgccttcaccaatcaccagattgcgttgtttgaacgtgtt
ctggcggatttgcgtgcagaagggattgaccccggtacaacgcatctgcagaacagctat
ggaattttaaattatccgaacctgcattatgattatgtacgtccgggtctattatggatg
ggagttaccagcgatgatgcactggcaattcgcacggcaccgcagtttcagcccatcatg
gaatggaaggcaaatgtttccctggtaaaggatatccagcccggtgttacggtcagctac
ggccgtcatttcaaggcggaagtctgtacgagggtggcaacactggctgtcggatatgcg
gatggctttccgcgcagtgtatccaatcagggagcctgtgtgctgctgcatggcaggcgt
gttcccattatcggcaatatctgtatggatcagatgatggtggatatcaccggacttgat
ggtgtgagtgaaggcgatgtcgctactctgatcgggtgtgacggtgatgaggttctttcc
gttgatgagctcagcagacttgcacataccataaacaatgaaacactctgctggatttca
cagcgggtaccgagaatatacaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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