KEGG   Clostridium innocuum: G4D55_13550
Entry
G4D55_13550       CDS       T06525                                 
Name
(GenBank) RluA family pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
ciu  Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ciu03009]
    G4D55_13550
Enzymes [BR:ciu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     G4D55_13550
Ribosome biogenesis [BR:ciu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    G4D55_13550
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Tap-RNA_bind
Other DBs
NCBI-ProteinID: QIX10037
Position
complement(2798457..2799410)
AA seq 317 aa
MKEFIINENDADQRVDKFIQKTMKTMPKSLMYKYIRNKKIKVNRKRCEISQRLQVGDTMQ
CYIPEEFYEVATMRSFLQVPNALDVVYEDDAVLLINKPKGLRAHSDTSEVQDNLADRLLH
YLYCKKEYDPTTEQSFTPALCHRIDRNTQGLVIAAKTAAALRCMNEKIALRQVEKKYLCI
VQGKLKKKQDHIVLYHRKNEQNTAEVIDREREGYTRMETGYRVLQEAERYSLVEVELHSG
KSHQIRALMSWLGHPLLGDVKYGARKTKEKTYQALCAYHVAFHFQGDACCLQYLNGRAFE
LQDTDIERQFADIARPF
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaaagaattcattatcaatgaaaacgatgcggatcagcgggtggataagtttatacag
aaaacgatgaagaccatgcccaagagcctgatgtataaatatataaggaataagaaaatc
aaggtgaatcggaaacgctgtgagatttcccagcgactgcaggtgggagacaccatgcag
tgctatatccccgaggagttttatgaagtagcaaccatgcgcagctttctacaggtcccg
aatgcactggatgtggtctatgaggatgatgctgttctgctgatcaacaagcccaaggga
cttcgcgcacacagtgacaccagtgaggtgcaggataatctggcagaccgcctgctgcat
tatctgtattgtaaaaaagaatacgatccaaccactgaacaaagctttacccctgccttg
tgccatcgtatcgaccgaaacacgcaggggctggtaattgcggctaaaacagctgcggct
cttcgctgcatgaatgaaaaaatcgcacttcgtcaggtggaaaagaaatatctgtgtatc
gtacaggggaaattgaaaaaaaagcaggatcatatcgtgctgtatcatcgaaagaatgag
caaaatacggcggaggttatcgatcgtgagcgggaaggctatacccgcatggaaacaggc
tatcgtgttttgcaggaggcagagcgctactctcttgttgaggtggagctgcacagcggt
aaaagtcatcagattcgagctcttatgagctggctgggacatcctctgctgggcgatgta
aaatacggggcgaggaagacaaaagagaagacttatcaggcactctgtgcgtatcatgtg
gcatttcattttcagggggatgcgtgctgtctgcagtatctcaacggcagagcattcgag
ctgcaggataccgatattgagcggcagtttgcggatatcgcaagaccgttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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