KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100387490
Entry
100387490         CDS       T03264                                 
Symbol
GPC1
Name
(RefSeq) glypican-1 isoform X1
  KO
K08107  glypican 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05205  Proteoglycans in cancer
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100387490 (GPC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100387490 (GPC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cjc00535]
    100387490 (GPC1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cjc00537]
    100387490 (GPC1)
Proteoglycans [BR:cjc00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   100387490 (GPC1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cjc00537]
 Others
  100387490 (GPC1)
SSDB
Motif
Pfam: Glypican
Other DBs
NCBI-GeneID: 100387490
NCBI-ProteinID: XP_035162140
Ensembl: ENSCJAG00000019058
Position
6:158194904..158226492
AA seq 558 aa
MELRARGWWLLCAAAAVVACARGDPASKSRSCSEVRQIYGAKGFSLSDVPQAEISGEHLR
ICPQGYTCCTSEMEENLANRSRTELETSLRDSSRALQAMLATQLRSFDDHFQHLLNDSER
ALQDAFPGAFGELYAQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHP
QLLLPDDYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV
PLGPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI
TDKFWGASGVESVIGGVHMWLAEAINSLQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRR
RGKLAPRERPPSGTLEKLVSEAKAQLRDIQDFWISLPGTLCSEKMALSTASDDRCWNGMA
RGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD
ASDDGSGSGSGDGCPDDLCGRKNSRKSSSSRTPLTHALPGLSEQEGQKTSAASCLQPPSF
LLPLLLALALTVARPRWR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggagctccgggcccgaggctggtggctgctgtgcgcggccgccgcggtggtcgcctgc
gcccgcggggacccggccagcaagagccggagctgcagcgaggtccgccagatctacgga
gccaagggcttcagcctgagcgacgtgccccaggctgagatctcgggtgagcacctgcgc
atctgcccccagggctacacctgctgcaccagtgagatggaagagaacctggccaaccgc
agccgcaccgagctggagacttcgctccgggacagcagccgagccctgcaggccatgctc
gccacccagctgcgcagcttcgatgaccacttccagcacctgctgaacgactcggagcgg
gcgctgcaggacgccttccccggcgccttcggagagctgtacgcgcagaacgccagggcc
ttccgggacctgtactcggagctgcgcctgtactaccgcggtgccaacctgcacctggag
gagacgctggccgagttctgggcccgcctgctcgagcgcctcttcaagcagctgcacccc
cagctgctgctgcccgacgactacctggactgcctcggcaagcaggccgaggcactgcgg
cccttcggggaggcccccagagagctgcgcctgcgggccacgcgcgccttcgtggctgct
cgctccttcgtgcagggcctgggcgtggccagtgatgtggtccggaaggtggctcaggtc
cccctgggcccggagtgctcacgggctgtcatgaagctggtctactgtgctcactgcctg
ggggtccctggcgccaggccctgccccgactattgccgaaacgtgctcaagggctgcctc
gccaaccaggccgacctggatgccgagtggaggaacctcctggactccatggtgctcatc
accgacaagttctggggtgcgtcaggtgtggaaagcgtcatcggcggcgtgcacatgtgg
ctggcggaggccatcaactccctccaggacaacagggacacgctcacagccaaggtcatc
cagggctgcggaaaccccaaggtcaacccccagggccccgggcctgaggagaagcggcgc
cggggcaagctggccccaagggagaggccaccctcaggcacactggagaagttggtctct
gaggccaaggcccagctccgcgacatccaggacttttggatcagcctcccagggacattg
tgcagtgagaagatggccctgagcactgccagtgatgaccgctgctggaacgggatggcc
aggggccggtatctccccgaggtcatgggtgacggcctggccaaccagattaacaatcct
gaggtggaggtggacatcaccaagccggacatgaccatccggcagcagatcatgcagctc
aagatcatgaccaaccggctgcgcagcgcttacaatggcaacgacgtggacttccaggac
gccagtgacgacggcagtggctcgggcagcggcgatggctgtccggatgacctctgcggc
cggaagaacagcaggaagagctccagctcccggacacccctgacccatgccctcccaggc
ctgtcagagcaggaagggcagaagacctcggctgccagctgtctccagccccccagcttc
ctcctgcccctcctccttgccctggccctcacagtcgccaggcctcggtggcggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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