KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100389152
Entry
100389152         CDS       T03264                                 
Symbol
FARSA
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit isoform X1
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100389152 (FARSA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cjc01007]
    100389152 (FARSA)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cjc03016]
    100389152 (FARSA)
Enzymes [BR:cjc01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     100389152 (FARSA)
Amino acid related enzymes [BR:cjc01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   100389152 (FARSA)
Transfer RNA biogenesis [BR:cjc03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100389152 (FARSA)
 Prokaryotic type
    100389152 (FARSA)
SSDB
Motif
Pfam: tRNA-synt_2d PheRS_DBD1 PheRS_DBD3 PheRS_DBD2 MarR_2 HTH_11 tRNA-synt_2 tRNA_synthFbeta ARM_FBXO47
Other DBs
NCBI-GeneID: 100389152
NCBI-ProteinID: XP_035142509
Ensembl: ENSCJAG00000004686
Position
22:complement(11401048..11412111)
AA seq 534 aa
MAVHAPDSGSGGSGPGRDTLNTLEAAMADGPVAELLLRRLEASDGGLDSADLAAELGVEH
QAVVGAVKSLQALGKVIEAELRSTKRWELTSEGEEIAQEGSHEARVFRSIPPEGLAQSEL
MRLPSGKVGFSKAMSNKWIRVDKSTADGPRVFRVVDSMEDDVQRRLQMVQWGQAEKLGEK
ERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLA
QGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQH
DTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYTWKLDEARKNLLRTHTTSASAR
VLYRLAQKKPFTPAKYFSIDRVFRNETLDATHLAEFHQIEGVVADHGLTLGHLMGILREF
FSKLGITQLRFKPAYNPYTEPSMEVFSYHPGLKKWVEVGNSGVFRPEMLLPMGLPENVSV
IAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYDSPLCRLDAKPRPPPTQEAA
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcggtgcacgctccggattccggttccggtggctcaggccccggccgggacactctg
aatacactggaagcagccatggcggatggtccagtggcggaactgctgctccggcggttg
gaggcgtccgatggcggcctggacagtgcggacctggcggccgagctgggcgtggagcat
caggcggtggtgggcgccgtgaagagccttcaggcgctgggcaaggtcatcgaggctgaa
cttcgctccaccaagcgctgggagcttacttcggagggcgaggagattgcccaggagggc
agccatgaggcccgtgtgtttcgaagcatcccccccgagggcctggcccagagcgagctt
atgcgactgcccagtggcaaagtggggttcagcaaggccatgtccaacaagtggatccgg
gtggacaagagcacggccgatgggccccgggtgttccgagtggtggacagcatggaggac
gacgtgcagcggcggctccagatggtccagtggggacaggctgagaagctgggggaaaag
gagaggagtgagctgaggaagaggaagctcctggctgaagtgaccctgaagacctactgg
gtgagcaaaggcagtgcctttagtaccagcatctccaagcaggagacagagctgagccca
gagatgatctccagtggctcctggcgggaccggcccttcaagccctacaacttcttggcc
caaggcgtcctccctgacagcggccaccttcaccccctgctcaaggtccgctcccagttc
cgacagatcttcctggagatggggttcaccgagatgccgaccgataacttcattgagagc
tctttctggaactttgacgccctcttccagccccagcaacacccagcccgtgaccagcac
gacaccttcttccttcgagatccagccgaggccctgcagctcccaatggactacgtccag
cgggtcaagcggacccactctcagggcggctatggctcacaggggtacaagtatacctgg
aaactggacgaggcccggaaaaacctcctgcgcacccacaccacgtcagccagcgcccgt
gtgctctaccgccttgctcagaagaaaccctttacgccagccaagtacttctccattgac
cgagtattccggaacgagaccttggacgccacacacctggctgagttccaccagatcgag
ggcgtggtggcagatcacggcctcaccctgggccacctcatgggcattctgcgggagttc
tttagcaagctgggtatcacccaactccgcttcaagccagcctacaacccatacacggag
cccagcatggaggtgttcagctaccacccaggcctgaagaagtgggtggaggttggaaac
tcaggggtgttccgtccggaaatgctgctgcccatggggcttcccgagaatgtgtcagtc
attgcctggggcctctccctggagcgcccaacgatgatcaaatatggcatcaacaacatc
cgggagctggtgggccacaaggtgaacctgcagatggtgtacgacagtcccctctgccgc
ctggatgccaagccgaggccccctcctacacaggaggctgcatga

  All links  
Gene (40)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (9)   
   Pfam (9)   
All databases (63)   

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