KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100389934
Entry
100389934         CDS       T03264                                 
Symbol
TRIM9
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9 isoform X1
  KO
K10649  tripartite motif-containing protein 9/67
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjc04131]
    100389934 (TRIM9)
   04121 Ubiquitin system [BR:cjc04121]
    100389934 (TRIM9)
Membrane trafficking [BR:cjc04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    100389934 (TRIM9)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100389934 (TRIM9)
SSDB
Motif
Pfam: SPRY fn3 zf-B_box zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 PRY zf-RING_2 EntA_Immun
Other DBs
NCBI-GeneID: 100389934
NCBI-ProteinID: XP_035116387
Ensembl: ENSCJAG00000006884
Position
10:complement(81414150..81540375)
AA seq 795 aa
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDY
DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV
PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV
MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY
CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN
MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL
RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS
PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD
DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEDTDSEE
QTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCN
FETQSAPYSQLVDIKKLLAVAWFAFDPGSAHSDIILSNDNLTVTCSSYDDRVVLGKTGFS
KGVHYWELTVDRYDNHPDPAFGVARMDVMKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTN
RTEGGITKGATIGVLLDLNRKNLTFFINDEQQGPIAFDNVEGLFFPAVSLNRNVQVTLHT
GLAVPDFYSSRASIA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggaggagatggaagaggagttgaaatgccccgtgtgcggctccttctatcgggaaccc
atcatcctgccctgctctcacaatttgtgtcaagcgtgcgcccgcaacatcctggtgcag
accccggagtctgagtccccccagagccgtcgggcctcgggctccggggtttccgactat
gactatctggacctggacaagatgagcctgtacagcgaggcggacagcggctatggctcc
tacgggggtttcgccagcgcccccactaccccgtgccagaagtcccctaacggcgtccgc
gtgtttcccccggctatgccgccaccggccacccacctgtcaccggccctggccccggtg
ccccgcaactcctgtatcacctgtccccagtgtcaccgcagcctcatcctggatgaccgg
gggctccgcggcttccccaagaatcgcgtactggaaggggtaattgaccgctaccagcag
agcaaagccgcggccctcaagtgccagctctgcgagaaggcacccaaggaggccaccgtc
atgtgcgaacagtgcgacgtcttctactgcgatccgtgccgcctgcgctgccatccgccc
cgggggcccctagccaagcatcgcctggtgcccccggcccagggccgtgtgagccggcgg
ctgagcccgcgcaaggtctccacctgcacagaccacgagctggagaaccacagcatgtac
tgcgtgcagtgcaagatgcctgtgtgctaccaatgcttggaggagggcaaacactccagc
cacgaagtcaaggctctgggtgccatgtggaaactacataagagccagctctcccaggcg
ctgaacggactgtcagacagggctaaggaagccaaggagtttctggtacagctccgcaac
atggtccagcagatccaggagaacagtgtggagtttgaagcctgtctggtggcccagtgt
gatgccctcatcgatgccctcaacagaagaaaagcccagctgctggcccgtgtcaacaag
gagcatgagcacaagctgaaggtggttcgagatcagatctctcactgcacagtgaaattg
cgccagaccacaggtctcatggagtactgcttggaggtgattaaggaaaatgatcctagt
ggctttttgcagatttctgacgccctcataaggagagtgcacctcactgaggatcagtgg
ggtaaaggcacactcactccaaggatgaccacggactttgacttgagtctggacaacagc
cctctgctgcaatccatccaccagctcgactttgtgcaggtgaaagcttcctctccagtc
ccagcaacccctatcctacagctggaggaatgttgtacccacaacaacagcgctacgttg
tcctggaaacagccacctctgtccacggtgcccgccgatggatacattctggagctggat
gatggcaacggtggtcagttccgggaggtgtatgtggggaaggagacaatgtgcaccgtg
gatggccttcacttcaacagcacatacaacgctcgtgtcaaggccttcaacaaaacagga
gtcagcccatacagcaagaccctggtcctccaaacgtccgaggacacagattcagaagaa
cagaccctcccttttccagtgccttcggaaagattgccgctccgtagaatgagtcctttc
tcctccacccttaatctacaacccagcttccccgggagatcctactttgatttccgatcc
tcaccccaccagctgagcttgcattcctctttacagtctctcaatgcaccgggatgcaat
tttgagacacaatctgcaccttactctcaattagttgacattaaaaagctcttggcagtg
gcctggtttgctttcgatcctggctcggcgcactcagacatcatcctctccaatgacaac
ctgacagtgacctgcagtagctatgacgaccgggtggtgctagggaagactggcttctcc
aagggagtccactactgggagctaacggtagatcgctatgacaaccaccctgatcctgcc
tttggcgtggctcgcatggacgtgatgaaggatgtgatgttaggaaaggacgacaaagct
tgggcaatgtatgtggacaataaccggagctggttcatgcacaacaactcgcacaccaac
agaactgagggagggatcacaaaaggggccacaattggggtcctcctcgacttaaataga
aaaaacttgacattttttatcaacgatgaacagcaaggtcctatagcatttgataatgtg
gagggcctgttcttccctgcggtcagcctgaacaggaacgtgcaggtcacgctgcacacc
ggcctcgcagtccctgacttctactccagcagagcatccatagcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (24)   
   RefSeq(nuc) (8)   
   GenBank (8)   
   EMBL (8)   
Protein domain (12)   
   Pfam (12)   
All databases (59)   

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