KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100391298
Entry
100391298         CDS       T03264                                 
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X2
  KO
K17936  sorting nexin-27
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjc04131]
    100391298 (SNX27)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cjc04990]
    100391298 (SNX27)
Membrane trafficking [BR:cjc04131]
 Protein recycling
  Others
   Others
    100391298 (SNX27)
Domain-containing proteins not elsewhere classified [BR:cjc04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100391298 (SNX27)
SSDB
Motif
Pfam: PX RA PDZ PDZ_6 SNX17-27-31_F1_FERM PDZ_2 USP7_C2 SNX17_FERM_C UBX RBD SNX17-31_F2_FERM DarA_N Ras_bdg_2
Other DBs
NCBI-GeneID: 100391298
NCBI-ProteinID: XP_008982618
Ensembl: ENSCJAG00000007791
UniProt: B0KWD2
Position
18:5006131..5101757
AA seq 542 aa
MADEDGEGIHPSAPHRNGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRG
QVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNHVNVEGATHKQVVD
LIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPRYKHVEQNGEK
FVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGL
EEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQ
VYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYIQNYTSAVPGTCLTIRK
WLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLR
TCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDT
DEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARPQQRDM
AT
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcggacgaggacggggaagggattcacccctcagcccctcacaggaacggaggtggc
ggcggcggcggcgggggttctgggctccactgcgccgggaacggcggcgggggaggcggc
ggcccgcgggtcgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtgcggggc
caagtgagcgagggcgggcaactgcggagcatcaacggggagctctacgcgccgctgcag
catgtgagcgccgtgctgcccgggggggcggccgatcgggccggggtgcgcaagggggac
cgcatcctggaggtgaaccacgtgaatgttgagggggcgacacacaagcaggtggtggac
ctgatccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcatgag
gcagataacctagatcccagtgacgactcgttgggacaatcattttatgattacacagaa
aagcaagcagtgcccatatcggtccccagatacaaacatgtggagcagaatggtgagaag
tttgtggtatacaatgtttacatggcagggaggcagctgtgttccaagaggtaccgggag
tttgctatcctacaccagaacctgaagagagagtttgccaactttacatttccccgactc
ccagggaagtggccattttcattatcggaacaacaattagatgcccgacgtcggggattg
gaagaatatctggaaaaagtgtgttcaatacgagtaattggtgagagtgacatcatgcag
gaattcctgtcggaatcagatgagaactacaatggtgtctctgacgtagagctgagagta
gcattaccagatggaacaacggttacagtcagggttaaaaagaacagtactacagaccaa
gtatatcaggctattgcagcaaaggttggcatggacagtacgacagtgaattactttgcc
ttatttgaagtgatcaatcattcctttgtgcgtaagttggcacctaatgagtttcctcac
aaactctacattcagaattatacatcagctgtgccaggtacctgcttgaccattcgaaag
tggctttttacaacagaagaagaaatcctcttaaatgacaatgaccttgctgttacctat
ttctttcatcaggcggtcgatgatgtgaagaaaggttacatcaaagcagaagaaaagtcc
taccaattacagaagctatacgaacaaagaaaaatggtcatgtaccttaacatgctaagg
acttgtgagggctacaatgaaatcatctttccccactgtgcctgtgactccaggaggaag
gggcacgttatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaagaa
ggacagctggagaaccaggtgatcgcatttgaatgggatgagatgcagcgatgggacaca
gatgaagaagggatggccttctgtttcgaatatgcacgaggagagaagaagccccgatgg
gttaaaatcttcacgccatatttcaattacatgcatgagtgcttcgagagggtgttctgc
gagctcaagtggaggaaagagaacattttccagatggcgaggccacagcagagagatatg
gccacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (13)   
   Pfam (13)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system