KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100395301
Entry
100395301         CDS       T03264                                 
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
  KO
K14296  nuclear pore complex protein Nup153
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013  Nucleocytoplasmic transport
cjc03250  Viral life cycle - HIV-1
cjc05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100395301 (NUP153)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100395301 (NUP153)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100395301 (NUP153)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100395301 (NUP153)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100395301 (NUP153)
SSDB
Motif
Pfam: Nup153 zf-RanBP Nup_retrotrp_bd
Other DBs
NCBI-GeneID: 100395301
NCBI-ProteinID: XP_002746241
Ensembl: ENSCJAG00000006685
UniProt: F7EHG8
Position
4:11624623..11700835
AA seq 1470 aa
MASGAGGVGGGGGGKIRMRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQKYFN
KNEDVCSCSTDTSEIPRWPENKEDHLIYANEDSSNITDGRITPEPAVSNTEEPSTTSTAS
NYPDVLTRPSLHRSHLNFSMLESSALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
ISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDVTDFQAKREKVDSQ
YPPVQRLMTPKPVSIATNRSVYFKPSLTPTGEFRKTNQRIDKKCSTGYEKNTTPGQNREQ
QESGFSYPNFSLPAANGLSSGGGKMRRERTRFVASKAPEKEEMEVPVLPKISLPITSSSL
PTFNFSSPGITASSPSPISSSQSLTNKVQMTSPSGTGSPMFRFSSPIVKSTEADVLPPSS
IGFTFSVPVAKTAELPGSSSTVESVLSSSAEDVTAVNSRSCKKKTPAEDCEGPFRPAKIL
KEGSVLDLLKSPGFASPKIDSLAAQPTTTSPLVYTRPAISSFSSSGTGFGESSKAGSSWQ
CDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVI
GTWDCDTCLVQNKPEVVKCVACETPKPGTGVKRVLTLTVVSESAETVTASSSSCTVTTGT
LGFGDKFKRPVGSWECSVCCVSNNAEDNKCVSCMSEKPGNSVPTSSSSTVPVSLSSEGSL
GLEKFKKPEGSWECDVCLVQNKADSTKCVACESAKPGTKSEFKGYDTSSSSLNPAASSSF
KFGIPSSSSGPSQTLTSTGNFKFGDQGGFKISVSSDSGSGNPVSEGFKFSKPIGDFKFGV
SSESKPEEVKKDNKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQQEKKEELPKSSSAGFS
FGTGVINPTPAAANTLVTSENKSSFNFGTIETKSASVAPFTCKTSEAKEEMPATKGGFTF
GNMEPASPPSATVFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPVFSFGNSEQTKDE
NSSKSTFSFNVTKPSEKESEQPAKATFAFGAQTSTTTDQGASKPVFNFLNNSSSNSSTPA
TSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNSAESSTSQSLLFSQDSKLATTS
STGTAVTPFVFGPGASSNSTATSGFSFGATTTSSSAGSSFVFGTGPSVPSASPAFGANPT
PTFGQSQGASQPNPPGFGSISSSTALFSTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFG
SGTTANSSSVFQFGSSTTNFNFTNNNPSGVFTFGANSSTPAASAQPSGSGGFPFNPSPAF
TVGSNGKNVFSSSGTAVPGRKIKTAVRRRK
NT seq 4413 nt   +upstreamnt  +downstreamnt
atggcctcaggagccggaggagtcggagggggcggtggcggcaagatccggatgcggcgt
tgccatcaggggccaattaagccttaccagcaggggcgacaacagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccagggtggctacaaaaatacttcaac
aagaatgaagatgtatgcagctgttcaacagacacaagtgagattccacgctggccagaa
aataaagaggaccatttgatatatgccaatgaggacagctctaacattactgatgggaga
atcacacctgagccagcagtcagtaatacagaagaaccttcaacaactagtactgcttca
aattatccagatgtgttaacaaggccttctcttcatcggagtcatctgaatttctctatg
ttggaatcctctgcattgcactgtcagccgtctacatcctcggcattcccaattggcagt
tcgggattttcccttgtaaaggaaattaaagattctacctcgcagcatgatgatgataac
atctcaactaccagtggtttttcttcaagagcttctgataaagatatagctgtttcaaag
aacacttcattgccacctctgtggtccccagaagctgaacgttctcactcactctcacag
cacactgccaccagctcaaaaaaaccagcattcaacttgtctgcctttggaacactttcc
ccttcacttgggaattcttcaatccttaagacgagtcagcttggagattctcctttttat
cctggaaaaacaacatatggtggggcagcagctgctgtaagacagtctaaactacgaaat
acaccttatcaggcaccagttagaagacagatgaaagctaagcaactcagtgcacaatct
tatggtgtgaccagttcaacagctcggcgaatattgcagtctttagagaagatgtcaagc
cctttagcggatgcaaaaagaattccatccattgtttcttctcctctgaattctcctctt
gataggagtgggatagatgtcacagattttcaggccaaaagagaaaaggtggattctcag
tatcctcctgttcagagacttatgaccccaaagccagtttccatagcaacaaatcgaagt
gtttattttaaaccctctctgactccaactggtgaattcaggaagactaatcaaagaata
gataaaaagtgcagtactggatatgaaaaaaatacgacaccaggacaaaatagagaacaa
caagaaagtggcttttcatatccaaatttcagtttacctgcagccaatggtttatcttct
ggaggtggcaagatgagacgagaaaggacacgctttgttgcttctaaagctccagagaaa
gaggaaatggaagttccagtattaccgaaaatctctctaccgatcaccagttcttcactg
cctacctttaatttcagttcccctggaatcacagcttcctctccatcacccatcagttcg
tctcaatcattaacaaacaaggtacagatgacctctccgagcggcactggcagtcccatg
tttagattttcatctccaatcgtaaaatctactgaggcagatgtactacctccatcatct
atcggatttacatttagtgtgcctgttgcaaaaacagcagaacttcctggttctagtagt
actgtagaatcagttttaagtagttcagctgaagatgtgactgcagtgaacagtagaagt
tgtaagaagaagacaccagctgaagattgtgagggtccttttagaccagcaaaaatcctg
aaagaaggaagtgttctagatcttctaaaaagccctggttttgcatcaccgaagatagat
tctcttgctgctcagcctaccacaacaagcccactagtttatacaagaccagcaataagt
agcttttcttcaagtggaactgggtttggggaaagttcaaaagctgggtcatcatggcag
tgtgatacatgtctactccagaacaaagttacagacaacaaatgcatagcctgtcaagca
gcaaaattgtcacccagagatactgctaaacagactggaattgaaacaccaaataaaagt
ggcaaaaccactctttctgcatcagggacaggctttggagacaagtttaaaccagtgata
ggcacttgggattgtgatacctgtttagtgcaaaataaacctgaagtggtaaaatgtgta
gcctgtgaaacaccaaaacctggaactggtgtgaagcgagtccttacattgacagtggtt
tctgaaagtgctgagactgtgactgcttcatcttctagctgcactgtgaccactggtacc
ttaggatttggagataaattcaaaaggcccgttggatcttgggagtgttcagtatgctgt
gtttctaataatgcagaagacaataagtgtgtgtcctgtatgtctgagaaaccaggaaat
tcagtacctacttcaagtagcagcactgtacctgtttctctgtcttctgagggttctcta
ggattggaaaagttcaagaaacccgagggaagctgggagtgtgatgtgtgcctagtgcag
aataaggcagactctaccaaatgtgtggcatgtgaaagtgcaaagccaggcacaaaatct
gaatttaaaggctatgacacatcttcctcatctttgaacccagcggcctcctcatccttc
aaatttggtatcccatcatcctcttctgggccttctcagactttaacaagcactggaaat
tttaaatttggagatcagggaggattcaaaataagtgtgtcctctgattctgggtctgga
aaccctgtgagtgaaggctttaaattttctaaaccaataggagattttaaatttggagtt
tcatctgaatctaagcctgaagaagttaaaaaagacaataagaatgataattttaagttt
ggactttcttctggtttaagcaacccagtttctttaactccatttcaatttggggtatct
aatcttggacagcaagaaaagaaagaggaactgcccaaatcttcatctgcaggttttagc
tttggtacaggtgttattaaccccacccctgctgctgctaacaccttagtgacctctgag
aacaagagcagtttcaactttggaaccatagaaacgaagagtgcttcagtggctcctttc
acatgtaagacatcagaagctaaagaagaaatgcctgccaccaaaggagggttcactttt
ggcaatatggaacctgcctctccgccatctgccacagtgtttgttttgggaaggacggaa
gaaaaacagcaagagcctgtcacttctacttccttagttttcgggaagaaagctgacagt
gaagagccaaagtgtcaaccagtgttttcctttgggaattcagagcaaaccaaagatgag
aattcttcaaagtccacatttagttttaatgtgacaaaaccatctgagaaggaatctgaa
cagccagcaaaagccacttttgcctttggagctcaaactagtactacaactgatcaaggt
gcatcaaagccagtttttaatttcttgaacaacagttcctctaattcaagtacaccagcc
acttctgctggtggtggcatatttggtagttccacctcttcctccaatccgcctgtagct
acctttgtatttggacagtccagcaatcctgtgagcagctctgcctttggtaactctgct
gaatccagcacctctcagtcgctgctattttctcaagatagcaaactagcaaccacatcc
agcacaggtacagctgtcaccccctttgtctttggtccaggagccagcagtaatagtact
gccacctctggtttcagctttggagccacaaccacatctagctctgcaggatcctccttt
gtatttggaactggaccctcagtaccttctgccagtccagcatttggtgctaacccgacc
ccaacatttggacaaagtcaaggtgccagccagcctaatcctccaggctttggatctata
tcatcttccacagcattattttccactggttctcagcctgcaccgcctacttttgggaca
gtgtcaagcagtagccagcctcctgtgtttggacagcaacctagtcagtctgcatttggc
tctggaacaactgctaattccagttcggttttccagttcggcagcagcactacaaatttc
aacttcacaaacaacaatccatcaggagtgttcacatttggtgcaaattctagcacacct
gcagcctcagcccagccttcaggctcggggggctttccgtttaacccgtctccagcattt
acagtggggtcaaatgggaaaaatgtgttctcatcttctggaactgcagtccctggccgc
aagataaagactgctgttagacgcagaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (67)   

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