KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100396689
Entry
100396689         CDS       T03264                                 
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100396689 (MED13L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100396689 (MED13L)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     100396689 (MED13L)
SSDB
Motif
Pfam: Med13_C MID_MedPIWI Med13_N
Other DBs
NCBI-GeneID: 100396689
NCBI-ProteinID: XP_035113634
Ensembl: ENSCJAG00000009580
Position
9:complement(115494326..115801011)
AA seq 2211 aa
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
YFYPMVLKKKEELKEEDELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVAN
TGGHITVGQQGLGSVKDPSNCGMPLTPPTSPEQAILGESGGMQSAASHLGSQDGGMITMH
SPKRSGKIPPKLHNHMVHRVWKECILNRTQYKRSQMSTPTLEEEPASNPATWDFVDPTQR
VSCSCSRHKLLKRCAVGPNRPPTISQPGFSAGPSSSSSLPPPASSKHKTTERQEKGDKLQ
KRPLIPFHHRPSVAEELCMEQDTTGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQM
NLNPMDSPNSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV
LVGQRLPLMAEVSETALYCGIRPSNPESSDKWWHSYRLPPCDDTEFRPPELQGERCDAKM
EVNSESTALQRLLAQPNKRFKIWQDKQPQMQPLHFLDPLPLSQQPGDSLGEVNDPYTFED
GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK
TDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTE
DRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMES
PMVSMVSAQLTEFKMEVEDGLGSPKPEEIKDFSYVHKVPSFQPFVGSSMFAPLKMLPSHC
LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT
PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG
SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI
KGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR
LLMCQTTFLPQAEGTRKSQEPPISLLLLLQSQHTQPFASLSFLDYISSNNRQTLPCVSWS
YDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSS
QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL
PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD
LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSGEENDNHSRLK
LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQGQAMPGNAGTLAPNSGSTAPPAG
SAFNPTSNSSSTNPAASSSASGSSVPPVSSSASAPGINQISTTSSSGFSGSVGGQNPSTG
GISTDRTQGNIGCGGDTDSGQSSSQPSQDGQESVTERERIGIPTEPDSADSHAHPPAVVI
YMVDPFTYSSEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDE
QVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPP
FILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIA
LPNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGEC
SLQTISKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALN
MQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDI
GILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGY
FVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDS
KTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL
NT seq 6636 nt   +upstreamnt  +downstreamnt
atgactgcggcagcgaactgggtggcgaacggggcgagcctggaggattgtcactccaac
ctcttttcgctggctgaactcacgggaatcaaatggcgtaggtacaattttggagggcat
ggggactgtggacccataatatcagccccagcccaagatgatccaattctgttaagtttc
atccggtgtctgcaagctaacctgctttgtgtatggcgtcgtgatgtcaaaccagattgt
aaagagttatggatattctggtggggagacgaacccaacctagtgggtgtcatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaagcgatccacaatctgttagaaaggtgcctaatggataagaacttcgtt
aggattgggaaatggtttgtccgaccgtatgaaaaggatgaaaagccagtcaacaaaagt
gagcatttgtcctgtgctttcacattctttctgcatggagaaagtaatgtatgcacaagt
gtggagattgcccagcaccagccaatttatttgatcaatgaggagcatatacacatggct
cagtcttcacctgcaccatttcaagtactggtaagtccttatggcttaaatgggacgctg
acaggccaagcatacaagatgtcagacccagccactcgcaagttgatcgaggaatggcag
tatttctacccgatggtgctaaaaaagaaagaggaattgaaagaggaagatgagttggga
tatgatgatgatttccctgtggcagttgaagtaattgttggtggtgttcggatggtttac
ccttcagcatttgttttgatctctcagaatgacatcccggttcctcagagcgttgccaat
actggaggccacattacagttgggcagcaagggcttggtagcgtgaaggacccaagtaac
tgtgggatgcctctgacccctcccacctctcctgaacaggctatcctaggcgagagtgga
ggtatgcagagtgctgccagtcacctaggttcccaagatggggggatgataactatgcac
agtccaaagagatcggggaagattcctccaaaactccacaatcatatggtccatcgagtc
tggaaggaatgcatcctcaacagaacccagtacaagaggagccaaatgtcaactccaact
cttgaagaagagcctgctagcaatcctgctacttgggattttgtggatccaacccaaaga
gtcagctgttcttgttctaggcataagcttttaaaacgttgtgcagtaggacccaatcga
cctcccacaatatctcaaccagggttcagtgcaggaccatcatcatcttcatctttaccg
cctcctgcttcttctaagcacaaaacaacagaaagacaagaaaaaggagacaagctgcaa
aagagaccgttaataccatttcaccacaggccctctgtggccgaagaattatgcatggaa
caagatacaacaggacagaaactagggttggcagggatagactcctccttagaggtgtct
agcagtaggaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaaatg
aatctgaatcctatggattcacctaattcccctatatcccctctgccgccaacactcagc
cctcagccacgaggccaggaaacagagagtttggacccaccatcagtccctgtgaatcca
gccctctatggaaatgggctagaactccagcagttgtctactctggatgacagaactgtc
ctcgtaggccaaagactgcctctcatggcagaggtcagcgagacagccttatattgtggg
attaggccctcgaacccagagtcatcagataagtggtggcatagttatcgtctccctccc
tgtgatgatactgagttcaggcctccagagctccagggtgagagatgtgatgccaaaatg
gaggtaaactcagagagcactgcattgcaaagactcttagcacaacctaacaaacggttt
aaaatctggcaagacaaacagccgcagatgcagccactccacttccttgacccattgcct
ctatcacaacaacctggagacagtttgggagaagtgaatgacccatacacctttgaagat
ggtgacataaaatacatctttacagccaacaagaaatgcaaacaaggaacggagaaagat
tccctgaaaaagaataagtcagaggatggatttggtaccaaggatgtcactacaccaggt
cattccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaa
acagatgtccggcaggataatgctgctggcagagctggctccagtagccttacgcaggta
acagatttggcaccttccctgcatgacttagacaacatctttgataattctgatgacgac
gaacttggggctgtatcacctgctctgcgctcatcaaaaatgcctacagttgggacagaa
gaccgacctcttgggaaggatggaagagctgctgttccttatccaccaacagttgcagac
ttgcaaaggatgttccccactccaccatctttggaacagcatcctgcattttctcctgtg
atgaattataaagatggtatcagttcagagacagtgacagcattaggcatgatggagagc
cctatggtcagtatggtttcagcacaactcacagaattcaaaatggaagtggaagatgga
ttaggaagtcccaagccagaggaaattaaggacttttcatatgtgcacaaagttccatcc
tttcaaccttttgtgggatcctccatgtttgctccactgaagatgttgccgagccattgt
ttgctacctctgaagatacccgatgcctgtctgtttcggccttcgtgggcaattcctcct
aaaattgaacaactgcccatgccccctgcagccactttcattagagatggctacaataac
gtgcctagtgttgggagcctagcagatccagactatcttaacacaccacagatgaacaca
cccgtgacgttgaacagtgctgccccagccagcaatagtggggcaggagtcctcccatct
ccagcaacccctcgcttctctgtccccacaccacgaacccccaggaccccaagaactccc
agaggtgggggcactgccagtggtcaggggtctgttaagtatgacagcactgatcagggg
tcaccagcctccaccccctctactacgcggcccctcaactctgtggagcctgccaccatg
caaccaattcctgaagcccacagtctctatgttaccctgattctctccgattccgtgatg
aatatctttaaagacagaaactttgacagctgttgcatctgtgcctgcaacatgaacatc
aaaggggcggatgtcgggctttacatcccggattcttccaatgaggaccagtaccgctgt
acctgtgggtttagtgcgattatgaaccgcaaacttggctacaattcaggactcttcctt
gaagatgagttggatatttttgggaagaattctgatattggtcaggctgcagagcggcgc
ctactgatgtgtcagacaaccttccttcctcaggccgaaggaaccagaaaatcccaggaa
ccacccataagccttctcctcctcctccagagtcaacacacacaaccttttgcttcactg
agtttcctggactacatttcctctaacaatcgccaaactcttccctgtgtaagctggagt
tatgaccgggtgcaagcagataataacgattactggacggaatgctttaatgcattggag
caggggcggcagtatgtggataaccccactggtggaaaagtggacgaagctctggtgaga
agtgccactgtgcactcttggcctcacagcaatgtgctggacatcagcatgctctcttcc
caggatgtggttcgtatgctgttgtccctgcagccctttctccaagatgccatccaaaag
aagcgcacgggaaggacctgggagaatatccagcatgtgcagggaccactcacttggcag
cagttccataaaatggcaggacggggaacctatggttcagaagaatctcctgagccgttg
cccatccccactctgctggtaggctatgacaaggatttcctcaccatctcaccattctcc
ttgccattttgggagaggctgttgttggacccatatgggggccaccgtgatgttgcctat
attgtggtgtgtccagaaaatgaggccttgctcgaaggagccaaaactttcttcagggac
ttgagtgctgtgtacgagatgtgtaggcttgggcagcacaagcccatctgcaaagtgcta
cgtgacgggatcatgcgtgtgggaaaaactgtggcacagaagctgacagatgagcttgtg
agtgagtggtttaaccagccttggagcggcgaggagaatgacaatcattccagactcaaa
ctttatgcgcaagtttgccgccatcacctagcaccttatttagccactctgcagcttgat
agcagcctgttgataccacctaaataccagaccccaccagcagcagcacagggacaagct
atgcctgggaatgctgggaccttagctccaaattcaggatcaacagctcccccagctggc
agtgcatttaatcccacctcgaatagtagttctacaaatcctgcagcaagtagttctgca
tctggttcctctgtgccaccggtctcatcgtctgcctctgctcctggtattaaccagata
agcactacctcttcttcaggattcagtggtagtgttggagggcagaaccccagcactggg
ggcatttctaccgatagaactcaagggaacataggctgtggcggagacactgactctggg
cagagctcctctcagccctcacaggatggacaagagagtgttacagaaagggagagaata
ggaattcccacagagcccgactccgcagacagccatgcccaccctccagctgtggtcatt
tacatggtggacccgttcacgtactcttcagaggaagactccacttctgggaacttttgg
ctgttgagcttgatgcgctgctacacagaaatgctggataatttacctgagcatatgaga
aattctttcattctccagattgtgccttgccagtacatgctgcagacaatgaaggatgag
caagttttctacattcaatacttgaagtccatggcattttcagtgtactgccagtgcagg
cgaccactgcctacacagatccacattaaatccctcacgggatttgggcctgcagccagc
attgagatgaccctcaagaaccctgagcggcccagcccaatccagctttactcccctccc
tttatattggccccaatcaaagacaagcagacagagctgggagagacatttggtgaggcg
agccagaaatacaatgtgctcttcgtgggctattgtctgtctcacgaccagcgctggctt
ttggcttcctgcactgacctccatggggaattattagagacctgcgttgtaaatattgct
ttaccaaacaggtcacggaggagtaaagtatctgcacgtaaaattggactgcagaagtta
tgggagtggtgcatagggattgtccaaatgacatctctgccctggagagttgtaatcggg
cgacttgggcggcttggccatggggagcttaaagattggagtatcctccttggagaatgt
tcactacagacaatcagcaaacagctcaaggatgtatgccggatgtgtggaatctctgcc
gcagactctccttctatccttagtgcctgcctggttgccatggagccccaggggtccttt
gtagtgatgccagatgctgtcacaatgggctctgtttttggccgaagtactgcactgaac
atgcagtcatctcagctcaacaccccgcaagatgcttcttgtacacacatcttggtgttc
ccaacatcttcaaccatccaggtggctccagccaactaccccaatgaagatgggtttagc
cccaacaatgatgatatgtttgttgaccttccattcccagatgatatggacaatgatatt
ggcatattaatgactgggaacctccattcctctcccaactcctccccagtcccctcccca
ggctctccttctggaattggtgtgggctctcacttccagcatagtcggagccagggtgaa
cgtcttctttctagagaagcaccagaggagctaaagcagcagccgttggctcttgggtat
tttgtatcaactgccaaagctgagaatcttccccagtggttttggtcgtcatgtccccag
gctcaaaaccagtgccctctcttcttaaaggcctcgctgcatcaccacatttcagtagca
cagacagatgaacttctgcctgccaggaattctcagcgggttccacaccctcttgactcc
aaaacgacgtctgatgttttaaggtttgttttggagcagtacaatgccctgtcctggctc
acgtgcaatccggccacccaggaccgtacttcctgccttcccgtccactttgtggtgctc
actcagttgtacaatgccatcatgaatatactttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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