KEGG T03264: 100398114

Callithrix jacchus (white-tufted-ear marmoset): 100398114

Entry

100398114         CDS       T03264

Symbol

PCDH19

Name

(RefSeq) protocadherin-19 isoform X3

K16499

protocadherin delta 2

Organism

cjc Callithrix jacchus (white-tufted-ear marmoset)

Brite

KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cjc04515]
    100398114 (PCDH19)
Cell adhesion molecules [BR:cjc04515]
Cadherins
  Protocadherins
   100398114 (PCDH19)

SSDB

Motif

Pfam:

Cadherin Cadherin_2 DUF7350

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

X:complement(93103790..93224923)

AA seq 1098 aa
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDARDAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNEMFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPRLGTVGLNIKVTDSNDNNPVFGE
STYTVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQINGEVRTTRTFGDSSKSSYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFMNVENQNTRANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLI
KSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHD
QNEGFHCREECRILGHSDRCWMPRNPMPIRSKSPEHVRNIIALSIEAAAADVEPYDDCGP
TKRTFATFGKDVSNHPAEERPTLKGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPLH
LKSPLPTKPSMSYTIALAPPARDLEQYVNNVNNGPSRPSEAEPRGADSEKVMHEVNPILK
EGRNKESPGVKRLKDIVL

NT seq 3297 nt +upstreamnt +downstreamnt
atggagtcgctcctgctgccggtgctgctgctgctggccgtactgtggacgcaggcagcc
gccctcattaacctcaagtactcggtggaagaggagcagcgtgccgggacggtgattgcc
aacgtggccaaggacgcgcgggatgcgggcttcgcgctggacccccggcaggcctcagcc
tttcgcgtggtgtccaactcggctccacacctagtggacatcaaccccagctctggcctc
ctggtcaccaagcagaagattgaccgtgacctgctgtgccgccagagccctaagtgcatc
atctcactcgaggtcatgtccagctcaatggaaatctgcgtgattaaggtagagatcaag
gacctgaacgacaatgcgcccagtttcccggcagcacagatcgagctggagatctcggag
gcagccagccctgggacacgcatcccgctggacagcgcctatgatccggactctggaagc
tttggcgtgcagacttacgagctcactcccaatgagatgttcggcctggagatcaagacg
cgtggcgacggctcgcgctttgccgaactggtagtggaaaagagcctggaccgcgagacg
cagtcgcactacagctttcgcatcactgcgctagacggtggcgacccgccacgcctgggc
accgttggcctcaacatcaaggtgaccgactccaatgacaacaacccggtgtttggcgag
tccacctacacggtgagcgtgccagaaaactcccctcccaacacacccgtcatccgcctc
aacgccagcgatccagacgagggcaccaacggccaggtggtctattccttctatggctac
gtcaacgaccgcacgcgcgagctctttcagattgacccgcacagtggcctggtcactgtc
actggcgctttagactatgaagagggccacgtgtatgaactggacgtgcaggccaaggac
ttagggcccaattccatcccggctcactgcaaggtcactgtcagcgtgctggacaccaat
gacaatccaccggtcatcaacctgctgtcagtcaacagcgagcttgtggaggtcagcgag
agcgcccccccgggctacgtgatcgccttggtgcgggtgtctgatcgcgactcgggcctc
aatggacgtgtacagtgccgtttgctgggcaatgtgccctttcgactgcaggaatatgag
agcttctccactattctagtggacggacggctggaccgcgagcagcacgaccaatacaac
ctcacaattcaggcacgcgacggcggcgtgcccatgctgcagagtgccaagtcctttacc
gtgctcatcactgatgaaaatgacaaccacccgcacttttctaagccctactaccaggtc
attgtgcaggagaacaacacacctggcgcctatctgctctctgtgtctgctcgcgacccc
gacctgggtctcaacggcagtgtctcctaccagatcgtgccgtcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaaccccaactcaggcgacatctacgcgctgcgatcc
tttaaccacgagcagaccaaggcgtttgaattcaaggtgctggccaaggacggcggcctc
ccctcactgcaaagcaacgcgacggtgcgggtcatcatcctcgacgtcaacgacaacacc
ccggtcatcacagccccacctctgattaacggcactgccgaggtctacataccccgcaac
tctggcataggctacctggtgactgttgtcaaggcagacgactacgatgagggcgaaaat
ggccgagtcacctacgacatgaccgagggcgaccgcggcttctttgaaatagaccagatc
aatggcgaagtcagaaccacccgcacctttggggatagctccaagtcctcctatgagctt
atcgtggtggcccacgaccacggcaagacatctctctctgcctctgctcttgtcctaatc
tacttgtcccctgctctcgatgcccaagagtcaatgggctctgtgaacttgtccttgatt
ttcattattgccctgggctccattgcgggcatcctctttgtaactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagcaagaagaaaaaaatcagtaagaatgacatccgt
ctggtaccccgggatgtggaggagacagacaagatgaacgttgtcagttgctcttccctg
acctcgtccctcaactattttgactaccaccagcagacactgcccctgggctgccgccgc
tctgagagcactttcatgaatgtggagaaccagaatacccgtgctaaccacatctaccat
cactctttcaacagccaggggccccagcagcctgacctgattatcaacggtgtgcctctg
cctgagactgaaaactattcttttgactccaactacgtgaatagccgagctcatttaatc
aaaagcagctccaccttcaaggacttagagggcaacagcctgaaggatagtggacatgag
gagagcgaccaaactgacagtgagcatgatgtccagcgaagcctgtattgtgatactgct
gtcaatgatgtgctgaacaccagtgtgacctccatgggatctcagatgcctgaccatgat
cagaatgagggatttcattgccgggaagaatgccggattcttggccactctgacaggtgc
tggatgccccggaatcccatgcccatccgttccaagtccccggagcatgtgaggaacatc
attgcgctgtccattgaagctgctgctgctgatgttgagccttatgacgactgcggcccc
actaaacggactttcgcaacctttggaaaagatgtcagcaaccacccggctgaggagagg
cccaccctgaaaggcaagaggactgtggatgtgaccatctgcagtcccaaggtcaacagc
gttatccgggaggcaggcaatggctgtgaggcgattagccctgtcacctccccgctccac
ctcaagagccctctacccaccaagccttccatgtcttacaccattgcgctggctccccca
gcccgtgatctggagcagtatgtcaacaatgtcaacaatggcccttctcgtccctctgaa
gctgagccccgtggagctgacagcgagaaagtcatgcatgaggtcaaccccattctgaag
gaaggtcgcaacaaagagtcccctggtgtgaagcgtctgaaggatatcgttctctaa

All links

Gene (15)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system