KEGG T03264: 100406138

Callithrix jacchus (white-tufted-ear marmoset): 100406138

Entry

100406138         CDS       T03264

Symbol

PCDH17

Name

(RefSeq) protocadherin-17 isoform X3

K16499

protocadherin delta 2

Organism

cjc Callithrix jacchus (white-tufted-ear marmoset)

Brite

KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cjc04515]
    100406138 (PCDH17)
Cell adhesion molecules [BR:cjc04515]
Cadherins
  Protocadherins
   100406138 (PCDH17)

SSDB

Motif

Pfam:

Cadherin Cadherin_2 Cadherin_CELSR2_9th Cadherin_C_2 Cadherin_4 NUC153 PepSY

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

1:complement(57198857..57298830)

AA seq 1159 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGRSK
SGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIKV
EIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFA
LDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNS
PVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT
GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGA
LSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NFEQTKSFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNASDTPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASSSPTKACMEPCTSTKGSLDGCEAKPGALAEAGSQYLPTDSQYLS
PSKQPRDPSFMASDQMARVFADVHSRTSRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRK

NT seq 3480 nt +upstreamnt +downstreamnt
atgtacctttccatctgttgctgtttccttctatgggcccctgccctcacgcttaagaac
ctcaactactccgtgccagaggaacaaggggccggcacggttatcgggaacatcggcaag
gatgcccgactgcagcctgggcttccgccggcagagcgcggcggcggagggcgcagcaag
tctggtagctaccgggtgctggagaactcggctccgcacctgctggacgtggacgcggac
agcgggctcctctacaccaagcagcgcatcgaccgggagtccctgtgtcgccacaacgcc
aagtgccagctgtctctcgaggtgttcgccaacgacaaggagatctgcatgatcaaggta
gagatccaggacatcaacgacaacgcgccttccttcccctcggatcagatcgaaatggac
atctcggagaacgcagccccgggtacccgcttcccactcaccagcgcacatgaccccgac
gccggcgagaacgggctccgcacctacctgcttacgcgcgacgaccacggcctctttgca
ctggacgtcaagtcccgcggcgacggcaccaagttcccagagctggtcatccagaaggcc
ctggaccgcgagcagcagaatcaccatacgctcgtgctgactgctctggacggtggcgag
cctccacgttccgccaccgtacagatcaacgtgaaggtgattgactccaacgacaacagc
ccggtcttcgaggcaccgtcctacttggtggaattgcccgagaacgctccgctgggcacc
gtggtcatcgatctgaacgccaccgacgccgacgagggtcccaatggcgaagtgctctac
tccttcagcagctacgtgcccgaccgcgtgcgggagctcttctccatcgaccccaagacc
ggcctcatccgtgtgaagggcaacctggactatgaggagaacgggatgctggagatcgac
gtgcaggcccgagatctggggcctaaccccatcccagcccactgcaaggtcacggtcaag
ctcatcgaccgcaacgacaacgcgccgtccatcggtttcgtctccgtgcgccagggggcg
ctgagcgaggccgcccctcccggcaccgtcatcgccctggtgcgggtcactgaccgagac
tcgggcaagaacgggcagctgcagtgtcgggtcctgggcggaggagggaccggcggcggc
gggggcctgggcggacccgggggttccgtccccttcaagcttgaagagaactatgacaac
ttctacacggtggtgactgaccgcccgctggaccgcgagacgcaagacgagtacaacgtg
accatcgtggcgcgggacgggggctcgcctcccctcaactccaccaagtcgttcgcggtc
aagattctagacgagaacgacaacccgcctcggttcaccaaagggctctacgtgcttcag
gtgcacgagaacaacatcccgggagaatacctgggctctgtgctcgcccaggatcccgac
ctgggccagaatggcaccgtgtcctactctatcttgccctcgcacatcggcgacgtgtct
atctacacctatgtgtctgtcaatcccacgaacggggccatctatgccctgcgctccttt
aacttcgagcagaccaagtctttcgagttcaaggtgcttgctaaggactcgggggcgccc
gcgcacttggagagcaacgccacggtgagggtgacagtgctagacgtgaatgacaacgct
ccggtgatcgtgcttcccacgctgcagaacgacaccgcggagctgcaggtgccgcgcaac
gccggcctgggctatctggtgagcactgtgcgcgccctagacagcgacttcggcgagagc
gggcgcctcacctacgagatcgtggacggcaacgacgaccacctgtttgagatcgacccg
tccagcggcgagatccgcacgctgcaccccttctgggaggacgtgacgcccgtggtggag
ctggtggtgaaggtgaccgaccacggcaagcccaccctgtccgcagtggccaagctcatc
atccgttctgtgagcggctcccttcccgagggggtaccacgggtgaatggcgagcagcac
cactgggacatgtcgctgccgctcatcgtgactctgagcactatttccatcatcctccta
gcggccatgatcaccatcgccgtcaagtgcaagcgcgagaacaaggagatccgcacttat
aactgccgcatcgccgagtacagccacccgcagctgggcgggggcaagggcaagaaaaag
aagatcaacaaaaatgatatcatgctggtgcagagcgaagtggaggaaaggaacgccatg
aacgtcatgaacgtggtgagcagcccctccctggctacctcccctatgtacttcgattac
cagacccgcctgcccctcagctcgccccggtcggaggtgatgtatctcaaaccggcctcc
aacaacctgactgtccctcaggggcacgcgggctgccacaccagcttcaccggacaaggg
actaatgcaagcgacacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaag
gacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaacgacttcaactaaaagccaaccacttgaacaagaaccggaagagtgtgttaattgc
acagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttccctgca
gccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacctacagttgaagct
aatgttgagactgagacttatgaaactgtgaatcccactgggaaaaagactttttgtaca
tttggaaaagacaagcgagagcacactattctcattgccaacgttaaaccttatttaaaa
gccaaacgtgccctgagccctcttctccaagaggtcccctcagcatcaagcagcccaacc
aaggcatgcatggagccttgcacctcaacaaaaggctccctggatggttgtgaagcaaaa
ccaggagccctagctgaagcaggcagtcagtacttgcccactgacagtcagtatctgtcg
cccagtaagcaaccaagagacccttctttcatggcttccgatcagatggcaagggtcttt
gcagatgtgcattccagaaccagccgggattccagtgagatgggtgctgttcttgagcag
cttgaccaccccaacagggatctgggcagagagtccgtggatgcagaggaagttgtgaga
gaaattgataagcttttgcaagactgccggggaaatgacccagtggctgtgagaaagtga

All links

Gene (12)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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