KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100406168
Entry
100406168         CDS       T03264                                 
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X2
  KO
K04558  synphilin-1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05012  Parkinson disease
cjc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    100406168 (SNCAIP)
   05022 Pathways of neurodegeneration - multiple diseases
    100406168 (SNCAIP)
SSDB
Motif
Pfam: Ank_2 SNCAIP_SNCA_bd Ank_4 Ank Ank_5 Ank_3 Lzipper-MIP1 Y_phosphatase
Other DBs
NCBI-GeneID: 100406168
NCBI-ProteinID: XP_002744696
Ensembl: ENSCJAG00000017196
UniProt: F7I7Q4
Position
2:complement(83660820..83808914)
AA seq 918 aa
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDTQNEDKSVSSSSWNCGISTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKVVEYQKGGESDLGHQPEDL
SPGDGLGGPPGKNSEPSTPLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGL
CTSINGLSGKVCSTGSSENSPSNMAPFCVLSPLKSPHLRKASAVIRDQHKLSTEEPEISP
PLVKCGSAYENQSKDFLNKTFSDSHGRKVEKTTPDCQLRAFHLQSSAAESKQEEQVSSMN
WPSSQSPEERSEYLKKVKSILSIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGH
AECLQHLTSLMGEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPS
LIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGAN
VTMQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQ
LQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLS
ASSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKREL
KLARLRQLMQRSLSESDTDSNNSEDPKNTPVRKADRPRPQPIVESVESMDSTESLHLMIK
KHTLASGGRRFPFGIKASKSLDGHSPSPTSESSEPDLESQYPGSGSTPPNQPSGDPPQPS
PDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGR
TLQRTSTSNESGDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTA
DAKGNPASSASKGKNKAA
NT seq 2757 nt   +upstreamnt  +downstreamnt
atggaagcccctgaataccttgatttggatgaaattgactttagtgatgacatatcttat
tcagtcacatcactcaagacgatcccagagctgtgccgaagatgtgatacgcaaaacgaa
gacaaatcagtttctagctctagctggaattgcggcatctcaactcttattacaaacaca
cagaagcccacaggaatcgctgatgtgtacagtaagttccgcccagtgaagcgtgtttca
ccactgaaacatcagccagagactctggaaaacaatgaaagtgatgaccaaaagaaccag
aaagtggttgagtaccagaaagggggtgagtctgacctgggccaccagcccgaggatctc
agccctggagatggactgggcggcccaccaggtaagaactctgagcccagcacaccactg
ggtgaactggagcactatgaccttgacatggatgagattctggatgtgccttatattaaa
tccagtcagcagcttgcctcttttaccaaggtaacttcagaaaaaagaattttgggctta
tgcacaagcatcaatggcctttctggcaaagtctgctctacaggaagttctgagaactca
ccatccaacatggcaccattttgtgttctttctcccttgaaaagccctcacttgagaaaa
gcatcagctgtcatccgcgatcagcacaagctgtccactgaagaacccgagatctcacct
cctctggttaaatgtggctctgcatatgaaaaccagagtaaagacttcctaaacaagaca
tttagtgattctcatggtcgaaaagttgagaagacaacaccagactgccagctcagggcc
ttccacttgcaatcctcagcagcagaatccaaacaagaagagcaggtcagtagcatgaac
tggcccagctcccaaagcccagaagaaagaagtgagtatctgaaaaaagtaaaaagcatc
ttgagcattgttaaagaaggacagatctctctactgccacacctagctgcagacaatcta
gacaagattcacgacgaaaatggaaacaatctattacatattgcggcgtcacagggacac
gcagagtgtctgcagcacctcacttctttgatgggagaagactgcctcaatgagcgcaac
actgagaagttgactccagcaggcctggccattaagaatggtcagttggagtgtgtacgc
tggatggtgagcgaaacagaagccattgcagaactgagttgttctaaggattttccaagc
ctcattcattatgcaggttgctatggccaggaaaagattcttctatggcttcttcagttt
atgcaagaacaaggcatctcgttggatgaagtagaccaggatggcaacagtgctgtccac
gtagcctcacagcatggctaccttgggtgcatacagactttggttgaatatggagcaaat
gtcaccatgcagaaccacgctggggaaaagccctcccagagcgccgagcggcaggggcac
accctgtgctccaggtacctggtagtggtggagacctgcatgtcgctggcctctcaggtt
gtgaagttaaccaagcagctgaaggaacaaacagtagaacgtgtcacactgcagaaccaa
ctccaacaatttctagaagcccagaaatcagagggcaagtcactcccttcttcacccagt
tcaccatcctcacctgcctccagaaagtcccagtggaaatctccagatgcagatgatgat
tctgtagccaaaagcaagccaggagtccaagaggggattcaggttcttggaagcctctca
gcctctagccgggctagacccaaagcaaaagacgaagattctgataaaatcctacgccag
ttattgggaaaggaaatctcagagaatgtctgcacccaggaaaaactgtccttggaattc
caggatgctcaggcttcctctagaaattctaaaaagatcccactggagaagagggaactg
aagttagccaggctgagacagctgatgcagaggtcactaagtgagtctgacacagactcc
aacaactccgaggaccccaaaaacaccccagtgaggaaggctgaccgaccaaggccacag
cccattgtagaaagtgtagagagtatggacagtacagaaagcctgcacctgatgatcaag
aaacataccttggcatcagggggacgcaggtttccttttggcatcaaggcctccaaatcc
ctggatggccatagcccatctcccacctcagagagcagtgaaccagacttggaatcccag
tatccaggctctgggagcactcctccaaaccagccttctggtgaccctccacagcccagt
cctgacagcactgctgcccagaaagttgccacaagtcccaagagtgccctcaagtctcca
tcttccaagcgcaggacatctcagaacttgaaactgagagttacctttgaggagcctgtg
gtgcagatggagcagcctagccttgaactgaatggagaaaaagacaaagacaagggcagg
actctccagcggacctccacaagtaacgaatcaggggatcaactgaaaaggccttttgga
gcctttcgatctatcatggagacactaagtggcaaccagaacaataataataactaccag
gcagccaaccagctgaagacctctacattgcccttgacctcacttgggaggaagacagca
gatgccaagggaaaccctgccagctctgctagcaaaggaaagaataaggcagcataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (19)   
   RefSeq(nuc) (11)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (56)   

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