KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100407382
Entry
100407382         CDS       T03264                                 
Symbol
SEMA3F
Name
(RefSeq) semaphorin-3F isoform X1
  KO
K06840  semaphorin 3
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100407382 (SEMA3F)
SSDB
Motif
Pfam: Sema Ig_3 I-set PSI ig Ig_6 Ig_2 V-set
Other DBs
NCBI-GeneID: 100407382
NCBI-ProteinID: XP_035131461
Ensembl: ENSCJAG00000004851
Position
15:26496774..26530346
AA seq 784 aa
MLVASLLLWALLTGAWPAFPTQDHLPAMPRVRLSFKELKATGTAHFFNFLLNTTDYRILL
KDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASQQRIEECVLSGKDGNGECGNFVRL
IQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQATPWTQVQVVRGRGSRATDGALRPTPTAP
RQDYIFYLEPERLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQT
AMRTDQYNSRWLNDPSFIHAELIPDSSERNDDKLYFFFRERSAEAPQSPAVYARIGRICL
NDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTLDVRNPVIYAVFTS
SGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPSM
KSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEVL
FLGTDRGTVQKVIVLPKDDQELEELMLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVT
HLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRGF
NSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPGDRRREIRAEDRFLRTEQ
GLLLRALQLSDRGLYSCTATENNFKHVVTRVQLHVLGRDAVHAALFPPLAVSALPSPGTG
PPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPGALRPPESQDQKKPRNRRHH
PPDT
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgcttgtcgccagtcttctcctctgggccctactcactggggcctggccagccttcccc
acccaggatcacctcccggccatgccccgggtcaggctttcattcaaagagttgaaggcc
acaggcaccgcccatttcttcaacttcctgctcaacacaactgactaccgaatcctgctc
aaggacgaggaccacgaccgcatgtatgtgggcagcaaggactacgtgctatccctggac
ctgcacgacatcaaccgcgagcccctcattatccactgggcagcctcccaacagcgtatt
gaggagtgcgtgctctcaggcaaggatggcaacggtgagtgtgggaacttcgtcaggctc
atccagccctggaaccgaacacatctgtatgtgtgcgggacgggtgcctacaaccccatg
tgcacctatgtgaaccgtggccgccgtgcccaggccacaccatggacccaggtgcaggtg
gtcagaggccgaggcagcagagccacggatggtgccctccgcccgacacccacagcccca
cgccaggattacatcttctacctggagcctgagcgactcgagtcagggaagggcaaatgt
ccgtacgaccccaagctggacacagcgtcagccctcatcaatgaggagctctatgctggt
gtgtacatcgattttatgggcactgacgcagccatcttccgcaccctcggaaagcagacg
gccatgcgcacggatcagtataactcccggtggctgaacgacccgtcgttcatccatgct
gagctcattcctgacagctcggagcgtaatgatgataagctctacttcttcttccgtgag
cggtcggcagaggcgccgcagagccccgctgtgtacgcccgcatcggacgcatctgcctg
aatgatgacggtggtcactgttgcctggtcaacaagtggagtacattcctgaaggctcgg
cttgtctgctctgtgccgggcgaggatggcattgagactcacttcgatgagctccaggac
gtgtttgtccagcagaccctggacgtgaggaaccctgtcatttacgctgtctttacctcc
tctggctctgtgttccgaggctctgctgtgtgtgtctactccatggctgacattcgcatg
gtcttcaacgggccctttgcccacaaggaaggccccaactaccagtggatgcccttctca
gggaagatgccctacccacggccgggcacgtgccctggtggaaccttcacgccatccatg
aagtccacgaaggactatcctgatgaggtgatcaacttcatgcgtagccacccgctcatg
tatcaggccgtgtaccctctgcaacggcggcccctggtggtccgcacaggtgctccctac
cgcctcaccactgtcgctgtggaccaggtggatgcagctgatgggcgctatgaggtgctt
ttcctgggcacagaccgcgggacagtacagaaggtcattgtgctgcccaaggatgaccag
gagttggaagagctcatgctggaagaggtggaggtcttcaaggacccagcacccgtcaag
accatgaccatctcttccaagaggcaacaactctatgtggcgtcggctgtgggagtcaca
cacctgagcctgcaccgatgccaggcgtatggggctgcctgtgctgactgctgccttgcc
cgggacccttactgtgcctgggatggccaggcctgctcccgctatacagcatcctccaag
aggcggagccgccggcaggacgtccggcatggaaaccccatcaggcagtgccgtgggttc
aactccaatgccaacaagaatgccgtggagtctgtgcagtatggtgtggctggcagtgcg
gccttccttgagtgccagccccgctcgcctcaagccactgttaagtggctgttccagcga
gatcctggtgaccggcgccgagagattcgtgcagaggaccgtttcctgcgcacagagcag
ggcttgttgctgcgtgccttgcagctcagtgatcgtggcctctactcctgcacagccacg
gaaaacaacttcaagcacgttgtcacacgagtgcagctacatgtactgggccgggacgcc
gtccatgctgcccttttcccaccactggctgtgagcgccctgccatccccaggcacaggc
cccccaacgcctccttaccaggagctggcccagctgctggcccaaccagaagtgggcctc
atccaccagtactgccaaggttactggcgtcatgtgccccccagccctagggaggctcca
ggggcactccggcctcctgagtcccaggaccagaaaaagccccggaaccgccggcaccac
cctccggacacatga

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (17)   
   RefSeq(nuc) (7)   
   GenBank (5)   
   EMBL (5)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

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