KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100407781
Entry
100407781         CDS       T03264                                 
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100407781 (CNOT3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100407781 (CNOT3)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100407781 (CNOT3)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100407781 (CNOT3)
SSDB
Motif
Pfam: Not3 NOT2_3_5_C Cluap1 DUF4407
Other DBs
NCBI-GeneID: 100407781
NCBI-ProteinID: XP_035141226
Ensembl: ENSCJAG00000001094
Position
22:45940084..45957673
AA seq 772 aa
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYSSGPPPTASALSATPGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGGGGGGSSSNSNSSAGGG
AGKQNGATSYSSVVADSPAEVALSSSGGNNANSQALGPPSGPHNPPPSTSKEPSAAAPTG
AGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTTPEIKAPEQ
TLSSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLG
VCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSD
TVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDE
FEQIPDHLFVHSLTAFSPGQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccataatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggagcggttcaaagttgtggagcgagagaccaaaacc
aaagcttacagcaaggagggcctgggcctggcccagaaggtggaccctgcccagaaggag
aaggaggaggtcggccagtggctcacgaataccattgacacgctcaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggatcgagggcttgaagcggcacattgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgttgatgcc
atccgcaagatcaaggacgacgttgagtactacgtcgactcatcccaggaccccgacttc
gaggagaatgagtttctctatgatgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acacccacctcgaccacctccagctctcccatccctcccagcccagccaactgtaccacg
gaaaactctgaagatgacaagaagagggggcgttccacagatagtgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtg
ccacccacctattcctctggccccccacccactgcctctgccttgagtgccacccctggc
aacaatggggcccctgccccagcagcacccccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccaccagct
cccagtgggcccagcaccacccagccccggccccccagcgtccagcctagtggaggcggt
ggaggtggcggcggaggcggagggagcagcagcaatagtaacagcagtgccggtggaggg
gctggcaagcagaatggcgccaccagttacagctcagttgtagcagacagcccagcagag
gtggctttgagcagcagtgggggcaacaatgccaacagccaggccctgggccccccttcc
ggcccccacaacccacctcccagcacctcgaaggaacccagtgcggcagccccaacaggg
gctgggggcgtggccccaggctcagggaacaactcggggggacccagtctcctggtgcca
ctgcctgtgaatcctcccagctccccaacgcccagcttcagtgatgccaaggcagctggt
gccctgctcaatgggcctccgcagttcagcaccaccccggaaatcaaggccccagagcaa
actttgagctccttgaagtccatggcagaacgggcagccatcagctctggcattgaggat
cccgtgccaacgctgcacctgactgagcgagacatcatcctcagtagcacatcagcacct
ccggcctcagcccagccacccttgcagctgtcagaggtcaacataccgctgtcgctgggt
gtctgtccactgggccctgtgcccctcaccaaggagcagctctaccagcaggccatggaa
gaggccgcctggcaccacatgcctcatccctctgattctgagcgtatccggcagtacctt
ccccggaacccctgtccgacacccccctaccaccaccagatgccacccccacactcggac
actgtggagttctaccagcgcctgtcgactgagacactcttcttcatcttctactatctg
gagggcactaaggcacagtacctggcagccaaggccctaaagaagcagtcgtggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgatgag
tttgagcagatcccagaccacctcttcgtccactcactgaccgccttctcccctggccag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga

  All links  
Gene (32)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (56)   

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