KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100409225
Entry
100409225         CDS       T03264                                 
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X2
  KO
K14438  chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100409225 (CHD9)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100409225 (CHD9)
SSDB
Motif
Pfam: SNF2-rel_dom BRK Helicase_C Chromo ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 100409225
NCBI-ProteinID: XP_017822304
Ensembl: ENSCJAG00000001573
Position
20:7700529..7986835
AA seq 2896 aa
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDFEQLNQFDSMKFHHINQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVSD
GSPMWGHQTATSISNQNGSPFHQQGHSHAMHQSKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMNVSGPHRVNINHPPQMTNASNSQQSLSMQQFSQSSNPSVH
FLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLAPNHTNQ
TLSDFTGSNSFSPHRGIKQESTQHILNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVHMN
FPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPHFDE
STFGQDNSSHILDHDLDRQFTSHLVTRPSDMAQTQLQSQARSWHSSFSNHQHLHDRNRLC
LQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKER
GERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLIIT
LGKKQKRKNESSDEISDAEQMPQHTLKDQDSQKRRSNRQIKRKKYAEDAEGKQSEEEVKG
SMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMIDTEEFFVKY
KNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLE
VSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRCLDRP
PSNIWNKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLY
EILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQG
RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH
KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMEL
RKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA
GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRA
SLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDID
QILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGR
NSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPYDRSNGYGRTECFRVEK
NLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLIHYRGDEKIKGFIWDLITPT
EDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHV
KHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDAD
KSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPA
PAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQ
IQQIQPTFLVPTSVMQPIYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPD
RGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEER
ASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVS
RTDYHILRDPELSFMAAQRNYSQNKMAHSKTSTPLLQQYQVALSASPLTSLPRLLEAKGI
ILEEMKVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKSET
DRRMVAARTEPLTPNPASKKQRGHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHS
RSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSEESDSDEEETQKRESTTHMKAYDEESVA
SLSTTQDETQDSFQMNNGTPESAYVLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDANTVASFYTTKLLDSPGAATDYSEPSVPTPPGVGVKEEHDQSTQMSKVKKHVR
EKEFTVKIKDEGGLKLTFQKQGLAQKRSFDGEDGALGQQQYLTRLRELQSASETSLVNFP
KSIPVSGTSIQPTLGANGVILDNQPIVKKRRGRRKNVEGVDILFFNRNKLPNHVTLGLTS
SQISRGINPALSYTQPQGIPDKESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVE
DLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKA
TAAAAAASATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPTGLSSG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKEPEGKKERTESQS
SENGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQ
SNTFDVQNKNSDLGSSKSVEVKEEDSRIKDQEDKGGTEPSPLNENSTDEGSEKADASSGS
DSTSSSSEGSDSSNED
NT seq 8691 nt   +upstreamnt  +downstreamnt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggtcctgtttcactagttgatgaattgaat
ttgggtgcagaatttgaaccgttgcacatagattcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattttgaacagttaaatcaatttgattcaatgaaatttcac
cacattaatcaatcttttggtagcccggctgaacatgtgttatctccacactctcagttt
aattgttctccaatccacccccaaaaccaacccaatggtttatttccagatgtatcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaaatcaaaatggatctcct
tttcaccaacaaggacattcacacgctatgcatcaaagtaaaagctttgtggcacaccat
gactttgccttattccaggccaatgaacaacaaacccagtgcacttcactacgctcacag
caaaacagaaataatctcaacccagggcagaattctcttagccagtctaaaaattttatg
aatgtttctggtccacatagagtcaacattaaccacccaccacaaatgactaatgcatct
aattcacaacagtctctttcaatgcagcaattttctcaatcgtcgaatccttcagtacac
ttcctcaagtgtagcagtcatcaagaaggaaattttaatggaccttccccaaatatgact
tcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagtaatcat
atatcaccaaacagtctacttcagtcctctgcagttcttgcacctaatcacacaaatcag
actttatctgattttactggaagtaattccttttcacctcatagaggaatcaagcaagaa
tctactcagcatatcctaaaccccaatacatcattgaattcaaataatttccaaatgttg
cattcgtcacatcctcagggtaattatagcaattcaaaattatctcctgtgcacatgaac
ttcccagatcctgttgactcaggaactcaaatgggccatttcagtgatcacgtagaaact
aatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaactgagcca
ttcacaggacttgaccccgaggacctccttcaggagggtcttcttcctcactttgatgag
tcaacatttggacaagataattcaagtcacattttagatcatgaccttgatcggcagttt
acttcacatcttgtaacacggccttctgatatggctcagactcagttgcaaagtcaggct
cggagttggcattcatcgttttctaatcatcagcatttacatgacagaaatcggctatgt
ttacagagacagcctccgtcttccaagaagagtgatggttctgggacatatactaagttg
cagaatacccaggtgagggtcatgtctgagaagaagcagagaaaaaaggtggaatcagaa
agcaagcaagaaaaggctaatcgtataatatcggaggccatagcaaaagcaaaggagcgt
ggggaacgcaatatcccacgggtaatgagccctgaaaactttcctagtgcttcagttgaa
ggaaaagaggaaaagaaaggtagaaggatgaaatccaagccaaaggacaaagacagcaaa
aaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattattaca
ttgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgcagaacag
atgccacagcatacattaaaagatcaagactctcaaaaaagaagatcaaatcgacaaatt
aaaagaaaaaaatatgcagaagatgcagaagggaagcaatctgaagaggaggtgaaaggc
tctatgaaaattaaaaagaattcagctcctttacctggtgaacagcctttacaattgttt
gtggagaatccgagtgaagaagatgctgcaattgtagacaaaattctatcttctagaatt
gtaaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgtaaaatac
aagaattactcctatcttcactgtgagtgggccacagaagagcagcttttgaaagataaa
aggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacattttttt
gcagacatggaggaagaaccatttaacccagactacgttgaagtagacagagtattagaa
gtctctttttgtgaagataaggatactggtgagcctgttatttactacttagtaaaatgg
tgctcattgccatatgaagatagtacttgggaactaaaagaagatgtagatcttgcaaaa
atagaagagtttgaacaactgcaagcttcaaggcctgatacaagatgtttggatcgtcct
ccttctaatatttggaataaaatagatcaatccagggactataaaaatggcaatcaactc
agggaatatcaactggaaggactcaattggctcttgttcaattggtacaatagacgaaac
tgcattttagcagatgaaatgggtcttggcaaaactattcagtcaattacattcctctac
gaaatccttctgactggtataagaggacctttcctgattattgctccactttctactatt
gcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttatcatggg
agcctgattagcagacagatgatacagcaatacgagatgtacttcagggattcacagggg
cgtatcatccgaggagcttatagattccaagccatcatcaccacttttgaaatgattctt
ggaggctgtggagagcttaatgcaattgaatggagatgtgtaattattgatgaagcacat
aggttaaaaaataaaaattgtaaactcttagaaggcctcaaactcatgaatctggaacac
aaggtgcttttgactggcacgcctctccaaaatacagttgaagaactgtttagtcttctt
cactttcttgaacctttaaggtttccttctgagtcaacatttatgcaagaatttggggat
ctgaaaacagaggaacaggtacagaaacttcaggctatcctgaaaccaatgatgttgaga
cgattaaaagaagatgtggaaaagaagttggcacctaaagaagaaaccattattgaagta
gaacttactaacattcaaaagaaatattaccgggctatcttggaaaagaacttttctttt
ttatccaaaggagcaggacaaactaatgtacctaacttggtcaataccatgatggagctc
aggaaatgctgcaatcatccatatcttatcaaaggtgctgaggaaaaaatacttggagaa
tttagagatacatataatcctgctgcttctgattttcatcttcaagcaatgatccagtct
gctggtaaattggtccttattgataagttacttcccaaaatgaaagctggaggtcataaa
gtgctcatcttctctcagatggttcgctgccttgacattctggaggattatctcatacat
aaaagatacttgtatgagcgaattgatggcagagtcagaggaaatcttcgacaagctgct
atagatagatttagtaaacctgattcagatagatttgtttttctcctgtgtacccgagct
ggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgattgg
aatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcagaacaaagca
gttaaagtctacagactggtgactcgtaactcatatgagagggagatgtttgaccgagcc
agtttgaaactgggcctagataaggctgtattacagagcatgagtggaagagaaagtaat
gttggtggtattcaacagctttccaaaaaggaaatagaagaccttcttcgaagaggtgct
tatggtgccattatggaggaagaagatgaaggctctaaattctgtgaagaggatatcgat
cagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtcaaca
tttgccaaggcaagttttgtggcatctggaaaccggacagatatttctttagatgatccc
aacttctggcaaaaatgggctaaaaaggcagaaatagatatagaggccatcagtggcaga
aacagcttggttattgacactccaagaattaggaagcaaacaagaccttttagtgccaca
aaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagcctaaactc
cggagaccctatgaccgttccaatggctatggaagaactgaatgctttagagttgagaaa
aacctgctagtttatgggtggggccgatggagagagattctatctcatggccgttttaaa
aggcagttaaatgaacacgatgtagaaataatttgccgagccctcttagcatattgcctt
attcactaccgaggagatgagaagattaaaggtttcatatgggatcttattactccgact
gaagatgggcagacacgagagctacagaatcatctaggcctatcagctcctgtacccagg
ggtcgaaaagggaagaaagtaaaaactcaaacaagctcatttgatatacaaaaagcagaa
tggcttcgaaaatataatcccgagcagctacttcaagatgaaggctacaaaaaacatgta
aaacaccactgtaacaaggttttgcttcgtgtgagaatgctatattatctaaagcaagaa
gttattggaaatgagtgtcagaaagtatttgatggagttgatgcgagtgacattgatgtt
tgggtaccagaaccagaccactcagaagttcctgctgagtggtgggattttgatgctgat
aagtcactccttattggagtttttaaacacggatatgaaaaatataacactattcgagca
gacccagcattatgcttcttggaaagagtgggaaaacccgatgacaaagcagttgctgcc
gaacagagagcaaatgattatatggatggggatgtggaagatccagaatacaaacctgca
ccagccatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgttata
gcagatggagatggtcaactgatggagggtgataaagtatattggcctactcaatcagct
ttaaccacacgtttgaggcgtctcatcactgcataccagcgtactaataaaaacagacaa
attcaacagatacaaccaactttcttggtgcctaccagtgtaatgcagcctatttatgag
gaagccactcttaatcctaaaatggcagccaaaatagaaagacagcaaagatggacaaga
agagaagaagctgacttttatagggttgtatctacatttggagtcgtttttgaccctgac
agaggccaatttgattggacaaaatttagagctatggctagactacataagaaaactgat
gatagtttggagaaatatttgtacgcattcatgtccatgtgtcggagggtttgtcgtctt
ccttccaaagaagaattggtggatccaaatatttttatccagcccatcacagaagaacgt
gcttctaggactttgtatcgcattgaacttctaaggaaagtacgggaacaggcccttcga
catccacagttgtttgaacgcttgaagctttgccatccaaatccagacttaccagtctgg
tgggaatgtggccctcatgacagggatttgcttattggtgctgccaaacacggggtgagc
cgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggaac
tacagtcaaaataagatggctcattcaaagacttccaccccacttttacagcaatatcaa
gtagcactttctgcttctcctcttacctctctacctaggctcctagaggctaaaggtatt
attctagaggagatgaaagttaaaagtgaaaatcttaaagaggagcctcagtcttctgaa
gaagaatctatgtcttctgtggaaaccaggacactaataaaatctgagcctgtaagtcca
aagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaagtgaaaca
gacagacgcatggttgcagccagaacggaacccctaactccaaacccagcttctaagaaa
cagagaggccacaaaagaggatcagaatctagttctgattctgactcagattctgagaga
tcatcctgttcttccagatcatcttcttcctcgtcatcctcctcctcttgttcccactct
agatcaggctctagttcttcttcttcttcatcttgttcttcagcatcttcttcatcctcc
tcctcttcctcatcctcttcctcttcatcttcatcagaagaaagcgacagtgatgaagag
gaaacccaaaaaagagagagtaccactcacatgaaagcctatgatgaagaaagcgtcgca
tcattgagcactacccaggatgagactcaggatagttttcagatgaacaatgggacacca
gagtctgcttatgtcttacaaggtggatatatgctggcggcctcctattggccaaaggat
cgtgtgatgatcaatcggttggacagtatttgtcaaacagttctgaaaggaaagtggcct
tcagctagaagaagttatgatgctaatacagtggcttctttctatacaacaaaactgctg
gacagccctggagcagctacagactacagcgagccaagtgtacccactcccccgggtgtc
ggtgttaaagaagaacatgatcagtcaacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaaagacgaaggtggtctgaagttgacatttcagaag
caagggcttgctcagaagagatcatttgatggtgaagatggtgctctggggcaacagcaa
tacctcactcggcttcgagagcttcaaagtgcatcagagaccagccttgtcaatttccca
aaatccataccagtatcaggtacttccattcaaccaactcttggtgccaatggtgtgata
ttagacaaccagcctatagtcaaaaaaaggcgaggaaggaggaagaatgtagaaggtgtt
gacatcctcttctttaacagaaataaactacctaatcatgttactttaggcttaacctcc
tcacagatttccagagggataaatccagcactgtcctatactcagcctcaaggaattcct
gataaagaaagtccagttccagttattaatcttaaagatggaacacgacttgcaggagat
gatgcaccgaagagaaaggatttggaaaaatggcttaaggagcacccaggttatgtggaa
gatttgggagcttttattcctagaatgcagcttcatgagggaaggcccaaacaaaaaaga
catcgttgcagaaaccccaataaactagatgtgaatagtctcaccggagaagaacgtgtt
caactgattaacagaagaaatgctagaaaggttggaggtgcattcgctccccctttaaaa
gatttatgtaggttcctaaaagaaaattcagaatatggagtagctcctgaatggggagat
gttgttaagcaatctggatttcttccagaaagcatgtatgaacgtattctcactggtccc
gtagtgagagaggaagtaagcaggcgggggagacggcctaaaagtggaattgcaaaggcc
acagcagcagcagcagctgcatctgccaccagtgtttcaggcaatcctttgttagccaat
ggattacttccaggtgtggatctcacaactcttcaggccttacaacaaaacctacaaaac
ttgcagtcactgcaagtaactgcagggttgatgggaatgcctactggcctttcttctgga
ggagaagctaaaaacatggctgctatgttccccatgctgctgtcaggaatggctggatta
ccaaatctgttgggcatgggaggactcctgacaaagcctacggaatctgggacagaagac
aaaaagggaagtgactccaaggagccagaaggaaaaaaagaaaggacagagagccaaagt
tcagagaatggtggagaaaactctgtgtcaagttctccgtccacgtcctctactgctgca
ttaaatacagctgcagctgccaacccattagctcttaacccactattactatctaatata
ctttatccagggatgcttctcactccaggccttaatcttcatattccaactttgtcccag
tccaatacttttgatgtacaaaacaaaaacagtgacttaggctcatctaagtctgtagaa
gttaaggaagaagattccagaattaaagatcaggaagacaaagggggaactgaaccaagt
cctctcaatgaaaacagcacagatgagggttcagagaaagctgatgcttcatctggatct
gatagtacatcatcgtcatctgagggttcagattctagtaatgaagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (15)   
   RefSeq(nuc) (11)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (65)   

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