KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100411431
Entry
100411431         CDS       T03264                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100411431 (KDM4A)
Enzymes [BR:cjc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100411431 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100411431 (KDM4A)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100411431 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 Tudor_5 53-BP1_Tudor LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 100411431
NCBI-ProteinID: XP_035107016
Ensembl: ENSCJAG00000003704
Position
7:77373708..77465905
AA seq 1096 aa
MASDSETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHIDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTLPTPEAAEFLKESELP
PRAGNEEECPEEDMEGVEDGEEGDLKTSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEEL
SSEHYEMTECPAALAPVRPTHSSVRQVEDGLAFPDYSDSTEVKFEELKNVKLEEEDEEEE
QEAAALDLSVNPSSVGGRLVFSGSKEKLSCSLGSSSSQDSVSSDSETSEPLSCRVQGQTG
ILTVHSYAKGDGRVTVGEPCTRKKGSAARSISERELAEVADEYMFSLEENKKSKGRRQPL
SKLPRHHPLVLQECVSDEETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNET
MAQQAPHCAVCMIFQTYHQVEFGGFSQNCGNAPDLAPQKQRTKPLIPEMCFTSTGCSTDI
NLSTPYLEEDGTSILVSCKKCSVRVHASECCSPFSVSCPRSMDLLTASPCHVLASQSLKG
CYGVPPAKASEDWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFV
NIAERSPVDVSKIPLPRFKLKCIFCKKRRKRTAGCCVQCSHGRCPTAFHVSCAQAAGVMM
QPDDWPFVVFITCFRHRIPNLERAKGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFY
EVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQV
EFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSR
YREDYIEPALYRAIME
NT seq 3291 nt   +upstreamnt  +downstreamnt
atggcttctgattctgaaactctgaatcccagtgctaggataatgaccttttatccaact
atggaagagttccgaaacttcagtagatacattgcctacattgaatcccaaggagctcat
cgggccgggctagccaaggtggttcctccaaaagagtggaagccacgagcatcctatgat
gacattgatgatttggtcattcctgcccccatccaacagctggtgacggggcagtctggc
ctctttactcagtacaacatacagaagaaagccatgactgttcgggagttccgcaagata
gccaacagtgataagtactgtaccccacgatatagtgagtttgaagagctcgagcggaaa
tactggaaaaatcttacattcaatcctccaatctatggtgcagatgtgaacggtaccctc
tatgaaaagcacattgatgagtggaatattggccggctgagaacaatcctggacttggta
gaaaaggagagtgggatcaccattgagggtgtaaacaccccatacctgtactttggcatg
tggaagacatcctttgcttggcacactgaagacatggacctctacagcatcaactacctg
cactttggagaaccaaagtcctggtactctgttccacctgagcatggaaagcggttggaa
cgcctcgccaaagggtttttccctggaagtgctcaaagctgtgaggcatttcttcgccac
aagatgaccctgatttccccgttaatgctgaagaaatatggaattccctttgacaaggtg
actcaagaggccggagagtttatgatcactttcccttatggttaccatgccggcttcaac
cacggctttaactgtgcggagtctaccaattttgctacccgtcggtggattgagtatggc
aagcaagctgtgctgtgctcctgtagaaaggacatggtgaagatctccatggatgtgttt
gtaaggaagtttcagccggaaaggtacaaactttggaaagctgggaaggacaacacagtt
attgaccatactctgcctacgccagaagcagctgagtttcttaaggagagtgaattgcct
ccaagggctggcaacgaggaggaatgcccagaggaggacatggaaggggtagaggatgga
gaggaaggagacttgaagacaagcctggccaagcaccgaatagggacaaagaggcaccga
gtttgtcttgaaataccacaggaggtgagtcagagtgagctcttccccaaggaggagctg
agttctgagcactatgagatgacggagtgcccggctgccctcgcccccgtgaggcccacc
catagctctgtgcgtcaagttgaggatggtcttgccttcccagattattctgactccact
gaagtaaaatttgaagaactcaaaaatgtcaaactagaagaggaggatgaagaggaagaa
caagaagcagctgccttggatctttctgtgaatccttcgtctgtagggggacgccttgtc
ttctcaggttccaaagagaaattgtcttgtagcctgggctccagctcttcacaggattct
gtctcttctgattcagaaactagtgagcctctctcctgccgagtccaagggcaaacagga
attctcactgtgcacagttacgccaaaggggatggcagagtcactgtgggagagccatgc
acgaggaagaaaggaagcgccgctagaagtatcagtgagagggagctggcagaggttgca
gatgaatacatgttttccctggaggagaataagaagtccaagggccgccgtcagccttta
agcaagctcccccgccatcacccacttgtgttgcaggagtgtgtcagtgacgaggagaca
tctgaacagctgacccctgaggaagaggctgaggagacagaggcctgggccaaacctctg
agccagctatggcagaaccgacctccaaactttgaggctgagaaggaattcaacgagacc
atggcccagcaggcccctcactgcgctgtctgtatgatcttccagacttaccatcaggtt
gagtttggaggctttagtcagaactgtggaaatgctccagatttggccccccagaagcag
aggaccaagccacttattccagaaatgtgcttcacttcaactggctgcagcacggacatc
aacctttctactccttaccttgaggaggatggtaccagcatactagtttcctgcaagaag
tgcagtgtccgggttcatgccagtgagtgctgctcacctttctctgtgtcctgtcccagg
agtatggacctgctcactgcaagtccttgccacgtactggcctcccagtccctaaaaggt
tgctatggggtcccccctgcaaaggcttctgaagactggatgtgttctaggtgttcagcc
aatgccttagaggaggactgctgtttatgctcattacgaggaggggccctgcagagagca
aatgatgacaggtgggtccacgtttcatgtgctgtggcaattctggaagcaaggtttgtc
aacattgcagaaagaagtccagtggatgtgagcaaaatccccctgccccgcttcaaactg
aaatgtatcttctgtaagaagcgcaggaaaagaactgctggctgctgtgtgcagtgttct
cacggccgctgcccaactgccttccatgtgagctgtgcgcaggctgcgggtgtgatgatg
cagcctgacgactggccttttgtggtcttcattacctgctttcggcacaggattcctaat
ttggagcgtgccaagggggccttgcaaagcatcactgcaggccagaaagtcattagcaag
cataagaatgggcgcttctaccagtgtgaggtggtcaggctcaccaccgagaccttctat
gaagtcaactttgatgatgggtccttcagtgacaatctttatcctgaggacatagtgagc
caggactgtctccagttgggtcctcctgctgaaggggaagtggtccaagtgagatggaca
gacggtcaagtctatggagccaagtttgtggcctcccaccctatccaaatgtatcaggtg
gaatttgaggatggctcacagcttgtggttaagagagatgatgtgtacacgctggatgaa
gagcttcccaagagagtcaagtctagactgtcagtagcctcagacatgcgcttcaatgag
attttcacagagaaagaggttaagcaagaaaagaaacggcaacgagttatcaactcaaga
taccgggaagattatatagagcctgcactataccgggccatcatggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (32)   
   RefSeq(nuc) (6)   
   GenBank (13)   
   EMBL (13)   
Protein domain (10)   
   Pfam (10)   
All databases (65)   

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