KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100411906
Entry
100411906         CDS       T03264                                 
Symbol
SSU72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X2
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100411906 (SSU72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100411906 (SSU72)
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100411906 (SSU72)
Enzymes [BR:cjc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100411906 (SSU72)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100411906 (SSU72)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100411906 (SSU72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 100411906
NCBI-ProteinID: XP_002750231
Ensembl: ENSCJAG00000010957
UniProt: F7ETE9
Position
7:complement(36850720..36880280)
AA seq 194 aa
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRTFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgtcgtccccgctgcgggtggcggtggtgtgctcgagcaaccagaaccggagcatg
gaggcgcacaatatcctcagcaaacggggattcagtgtccgatcctttggaacagggact
cacgtgaagcttccaggaccagctccggacaagcccaatgtttacgatttcaaaaccaca
tatgaccagatgtacaatgatcttcttaggaaagacaaagaactctatacacaaaacggc
attttgcacatgctggacagaaataagagaatcaagccccggccggaaaggttccagaac
tgcaaagacctgtttgatctgatcctcacttgtgaagagagagtgtacgatcaggtggtg
gaagatctgaattccagagaacaggagacctgccagcccgtgcacgtggtcaacgtggac
atccaggacaaccatgaggaggccaccctgggggcatttctcatctgtgagctctgccag
tgtatccagcacacggaggacatggagaacgagattgacgagctacttcaggagtttgag
gagaagagcgggcgcaccttcctgcacactgtctgcttctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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