KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100412703
Entry
100412703         CDS       T03264                                 
Symbol
ZNF548
Name
(RefSeq) zinc finger protein 548 isoform X2
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100412703 (ZNF548)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjc03000]
    100412703 (ZNF548)
Transcription factors [BR:cjc03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100412703 (ZNF548)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf-C2H2_6 C1_1 Zn-ribbon_8 XPA_N Zn_Tnp_IS1595 zf-C2HE
Other DBs
NCBI-GeneID: 100412703
NCBI-ProteinID: XP_008986995
Position
22:48704618..48737434
AA seq 533 aa
MDPVQDRVVFEDVAIYFSQEEWGHLDEAQRLLYRDVMLENLALLSSLGCWHGAEDEVAPS
QQGFSAGVSEVTTSESCMFTQKVYPSETCGPPLKDTLCLVEHSGIHPEQDIYIYEAELFQ
CPEQQIGENLSRGDDWIPSFGKNHRIHMAEEIFTLMEGWKDLPATSCLLQQQAPQSEWKP
YRDTEDREDFQTGQNDYKCSECGKIFTYRYSLVEHQKIHTGERSYECNKCGKFFKYSANF
VKHQTVHTSERTYECRECGKSFMYNYRLMRHQRVHTGERPYECSTCGKFFRYSSTFVRHQ
RVHTGERPYECRECGKFFMDSSTLIKHQRVHTGERPYKCNDCGKFFRYISTLIRHQRIHT
GERPYECSVCGELFRYNSSLVKHWRNHTGERPYKCSECGKSFRYHCRLIRHQRVHTGERP
YECSECGKFFRYNSNLIKHWRNHTGERPYECRECGKAFSHKHILVEHEKIHSGERPYECS
ECRKAFIRKSHLVHHQKIHSEERLVCSMNVGNSSATTPTSLNIRDFTMEKVYH
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggaccctgtacaggaccgtgtggtctttgaggacgtggccatatatttctcccaggag
gagtgggggcaccttgatgaggctcagagattgctgtaccgcgatgtgatgctggagaat
ttggccctactgtcctcactaggttgttggcatggagctgaggatgaggtggcaccttca
cagcaaggtttttctgcaggagtgtcagaggttacaacttcagagtcctgtatgttcacc
cagaaggtctaccctagtgagacatgtggcccgcccttgaaagacactctgtgcctggtt
gagcacagtggaattcatcctgagcaagacatatatatttatgaggcagagctttttcag
tgcccagagcagcaaattggagagaatctttccagaggggacgattggataccttcattt
gggaagaaccacagaattcacatggcagaggagatcttcacattgatggagggttggaag
gacttaccagccacctcatgccttctccagcagcaggcccctcaaagcgagtggaagcca
tacagggacacagaggacagagaagacttccagactggacaaaatgattacaaatgtagt
gaatgtgggaaaatattcacctacagatactcacttgttgagcaccagaaaatccacacg
ggagaaagatcttatgaatgtaacaaatgcgggaagttttttaagtacagtgccaatttc
gtgaaacatcagacagttcacactagtgaaaggacttatgagtgcagagaatgcggcaaa
tcatttatgtacaactaccgactcatgagacatcagagagttcacactggagaaaggcct
tatgagtgcagcacatgtgggaaattctttcggtacagctccacattcgttagacatcag
agagttcacaccggagaaaggccgtatgagtgcagggagtgtgggaaattctttatggac
agctccacactcattaaacatcagagagttcacactggagaaagaccttataagtgcaat
gattgtgggaagttttttaggtatatctccacactcatcagacatcagagaattcacact
ggagaaaggccttatgagtgcagtgtatgtggggaattgtttaggtacaactccagcctc
gttaaacattggagaaatcacactggagagaggccttataaatgcagtgaatgtgggaaa
tcatttaggtaccactgcagactcattagacaccagagagtccacacgggagaaaggcct
tacgagtgcagcgagtgtgggaagttctttcgttacaactccaacctcattaaacattgg
agaaatcacactggagaaaggccttatgagtgcagagagtgtgggaaagcctttagccac
aagcatatacttgttgagcacgagaaaatccacagtggagaaagaccttatgagtgcagc
gaatgccggaaggccttcattagaaagtctcacctggttcatcaccagaaaatccacagc
gaagagaggcttgtgtgctccatgaatgtggggaattcttccgctacaactccaacctca
ttaaacatcagagatttcacaatggagaaagtttaccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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