KEGG   Callithrix jacchus (white-tufted-ear marmoset): 108589014
Entry
108589014         CDS       T03264                                 
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
  KO
K04807  nicotinic acetylcholine receptor alpha-5
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108589014 (CHRNA5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cjc04040]
    108589014 (CHRNA5)
Ion channels [BR:cjc04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   108589014 (CHRNA5)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb Stealth_CR2 Cadherin_5
Other DBs
NCBI-GeneID: 108589014
NCBI-ProteinID: XP_054095503
Ensembl: ENSCJAG00000010409
Position
10:23516188..23545427
AA seq 469 aa
MAARGSGSRALRLLLLLVQLVAGRCGRAGAAGGAQGGSSEPSSIAKHEDSLLKDLFQGYE
RWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYGGIK
VIRVPSDSVWTPDIVLFDNADGRFEGTSTKTVIRYNGTVTWTPPANYKSSCTIDVTFFPF
DLQNCSMKFGSWTYDGSQVDIILEDQDVDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPH
VTYSFVIKRLPLFYSLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVI
EEIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHK
LPKLLCMRSHADRYFTQKEQTESGSGPKSSRNTMEAALDSIRYITRHIVKENDVREVVED
WKFIAQVLDRMFLWTFLFVSIVGSLGLFAPVIYKWANIIIPVHIGTANK
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcggcgcgggggtcggggtcccgcgcgctccgcctgctgctgctgctggtccagctg
gtcgcagggcgctgcggtcgagcgggcgcggcgggcggcgcgcagggaggatcatctgaa
ccttcttctattgcaaaacatgaagatagtttgcttaaggatttatttcaaggctatgaa
agatgggttcgtcctgtggaacacctgaatgacaaaataaaaataaagtttggacttgca
atatctcaattggtggatgtggatgagaaaaatcagttaatgacaacaaatgtctggttg
aaacaggaatggatagatgtaaaattaagatggaaccctgaggactatggtggaataaaa
gttatacgtgttccttcagactctgtctggacacctgacatcgttttgtttgataatgca
gatggacgttttgaagggaccagtacgaaaacagtcatcaggtacaatggtactgtcacc
tggactccaccggcaaactacaaaagttcatgtaccatcgatgtcacgttttttccattt
gatctacagaactgttccatgaaatttggttcttggacttacgatggatcgcaggttgat
ataattctagaggaccaagatgtagacaagagagatttttttgataatggagaatgggag
attgtgagtgcaacagggagcaaaggaaacagaaccgacagctgttgctggtatccgcat
gtcacttactcatttgtaatcaagcgcctgcctctcttttatagcttgtttcttataata
ccctgtatcgggctctcatttttaactgtacttgtcttctatcttccttcaaatgaaggt
gaaaagatttgtctctgcacgtcagttcttgtctctttaactgtcttcctgctggttatc
gaagagatcataccttcatcttcaaaagtcatacctctgattggagagtacctggtattt
accatgatttttgtgacactgtcaattatggtaactgtcttcgctatcaacattcatcat
cgttcttcctcaacacataatgccatggctccttgggtgcgcaagatatttcttcacaag
cttcccaaactgctttgtatgagaagtcatgcggataggtacttcactcagaaggagcaa
actgagagtggtagtggaccaaaatcttctagaaacacaatggaagctgcactcgattct
attcgctacattacaagacacatcgtgaaggaaaatgatgtccgtgaggttgttgaagac
tggaaattcatagcccaggttcttgatcggatgtttctgtggacttttcttttcgtttca
attgttggatctcttgggctttttgctcctgtaatttataaatgggcaaatataataata
ccagttcatatcggaactgcaaataagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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