KEGG   Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819: Cj0401
Entry
Cj0401            CDS       T00026                                 
Symbol
lysS
Name
(RefSeq) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cje  Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Pathway
cje00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cje00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Cj0401 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cje01007]
    Cj0401 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cje03016]
    Cj0401 (lysS)
Enzymes [BR:cje01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Cj0401 (lysS)
Amino acid related enzymes [BR:cje01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Cj0401 (lysS)
Transfer RNA biogenesis [BR:cje03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Cj0401 (lysS)
 Prokaryotic type
   Other AARSs
    Cj0401 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 904725
NCBI-ProteinID: YP_002343838
UniProt: P41258
Position
365717..367222
AA seq 501 aa
MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSYILEQVEKRDESVNAVV
AGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKNLEVGDIVLVKGFPFV
TKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKV
VSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELYLKRLIVG
GFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKT
IEFDGKMINFSKPFERITYKDALCKYGGLDRDLIEDKEKILTKLKADGFEANEKLELGHL
QAELFDNYVEEKLINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELN
DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS
IRDVILFPAMRPLKSELKEKE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtttgataatattttagagcagcaaagaatagaaaaagctaaggaattaaaaaattta
gggatcaatccttatcctcattttttagaaaaagaaatgtctttaaagacttttaaggat
aaattttcttatattttagagcaagttgaaaaaagagatgaaagtgtcaatgctgttgtt
gcaggacgtttgaaacttttgcgtatagctgggaaatcgatttttgcaaacattgaagat
gaggatacaaatttacaaatttattttagtaaagatagcgtaggcgaagagctttatacg
attttaaaaaagaatttagaggtgggtgatattgttttggttaaaggttttccttttgta
actaaaacaggtgagtttagtttacatgcaagtgaagtaaaactcgctacaaaagctatt
gttcctttacctgaaaaatatcatggattaacagatattgagcaaagatatcgtaaacgt
tatgttgatatgataatgaatgtcgaagttagaaaagattttttagtgcgttctaaagtg
gtgagtttaatccgtcatttttttgaaaataaaggctttttagaagtagaaactcctatg
atgcatccgattgcaggtggagcaaacgctaagccttttgtaacttttcataattcttta
ggcgtagaaagatttttaagaattgctccagaactttatcttaaaagacttatagtaggt
ggttttgaggcggtttttgaaatcaatcgttgttttagaaacgaaggtatggatttaact
cataatcccgaatttacaactatagaattttattgggcctatcataattataaagattta
atggatttaaccgaagaactttttgctttacttttggataaacttaatttaggaaaaaca
atagaatttgatggaaaaatgataaatttttctaaaccttttgaaagaataacctataaa
gacgcactttgtaagtatggtggtttagatagggatttaatcgaagataaggaaaaaatt
cttactaaattaaaagcagatggttttgaagcgaatgaaaagcttgaacttggacatttg
caagctgaactttttgacaattatgtggaagaaaaattgatcaatcctacttttgtgatt
gattttcctatttccataagtcctttatcaagacgtagcgatgaggattctcagattgct
gagagatttgagttgtttatttgcggaagagaattggcaaatggttttaatgagcttaat
gatcctcttgatcaatatgagagatttttaaaacaaattgaagctaaaaatgcaggcgat
gaagaggcttgtgaaatggatgaagattttgtaaatgctttgggttatggaatgcctcca
acggcagggcagggcataggtatagatagacttgttatgcttttgacaaataaaaaatcc
attcgtgatgtgatattgtttcctgcaatgcgtccattaaaatcagaactaaaggagaaa
gaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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