KEGG   Campylobacter jejuni subsp. jejuni 81-176: CJJ81176_0659
Entry
CJJ81176_0659     CDS       T00461                                 
Name
(GenBank) RNB-like protein
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
cjj  Campylobacter jejuni subsp. jejuni 81-176
Pathway
cjj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJJ81176_0659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjj03019]
    CJJ81176_0659
   03016 Transfer RNA biogenesis [BR:cjj03016]
    CJJ81176_0659
Enzymes [BR:cjj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CJJ81176_0659
Messenger RNA biogenesis [BR:cjj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CJJ81176_0659
Transfer RNA biogenesis [BR:cjj03016]
 Prokaryotic type
  tRNA degradation factors
   CJJ81176_0659
SSDB
Motif
Pfam: RNB CSD2 OB_RNB Orthopox_F14
Other DBs
NCBI-ProteinID: EAQ73339
UniProt: A0A0H3PEW9
Position
complement(586391..588325)
AA seq 644 aa
MKEFLNSLSYGISSHEVSNEFKQILRELLANHIIKEHKSKYYLNNGFAFGVLDISSKGTG
FLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPSAKVILVLKRANETSLVIT
KRYGEAVLGMNIKTGLSTALKASQKSLKALPLGTILKIENENNNIIEVLGHIDDESVDEK
ISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDLRALPFCTIDPIHAKDFDDAIYF
DIQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIYFPHIAIPMLPRPLSENICSLKPHL
DRLAYCFKIALDHENKVIKEELFEGIINSKRRFNYDEVDEILIQKPDLKELSWLYELFEI
TKNLRKMRLKNAFEFRTEELRMNLDENLSLKSTVFEKDTPSHNLIEDCMLLANKAAAKLI
DIGVFRNHLSADARKIDKLLNELRELGIDVNFKPNLPELIRDIQALSDELNLRAEVDKLI
IKAQKKAEYSSINAGHFGLGFDKYSHFTSPIRRYSDLILHRLLKAKQKNDEKLFNYLLLN
IESTCESLSTLEREADKVAFDFMDRKFARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKG
ADIILYDTRVNLLESVEVQIMEADIVMAKIYAKITQRLIKEENV
NT seq 1935 nt   +upstreamnt  +downstreamnt
gtgaaagaatttttaaacagtcttagttatggcattagctctcacgaagtaagcaatgaa
tttaaacaaattttaagagagcttttagctaatcatatcatcaaagaacacaaaagcaaa
tactatcttaacaatggttttgcctttggagtacttgatatttcaagcaaaggcacaggt
tttttacaatgctttgatgaaagtttcaaaaaagatcttttgatagaaaacaaaaaccta
aaaggtgcaaactataaagatatagtcgcagtaaaacttctacctttaaagaaaaaacgc
cccagtgcaaaggtgattttagttctaaaaagagccaatgaaacctctttagtgatcacc
aaaaggtacggcgaagccgtgcttggaatgaatatcaaaacaggattaagcactgcctta
aaagcttctcaaaaatccttaaaagcactacctttagggacaattttaaaaatagaaaat
gaaaataacaatatcatagaagttttaggacatatcgatgatgaaagcgtagatgaaaaa
atctccttagctctttttaataaaaataacgaatttagcgacgcttgcatcaaagaagct
ctagcaaacggcgatagtgttgatgcgagtatgtatgaaaatcgcatggatttaagagcc
ttgcctttttgcaccatagatcctatacatgcaaaagattttgatgatgcgatttatttt
gacatccaaaaacgagaaatttatgtagctattgctgatgttagcgaatatgtttatgct
tatagtgctatagataaagaagcaagaaatcgtggattttctatttattttccacatatt
gctatacctatgctacctcgtcctttaagtgaaaatatctgttctttaaaacctcattta
gatcgcttagcgtattgttttaaaatcgcactcgatcatgaaaataaggtcataaaagaa
gaactttttgaaggtattatcaactcaaaacgccgttttaattacgatgaagttgatgaa
attttgatacaaaaacctgatttaaaagagctttcatggctttatgagctttttgaaatc
acaaaaaatttacgcaaaatgcgtcttaaaaatgcctttgaatttcgcaccgaagaatta
agaatgaatttagatgaaaatttaagtctaaaaagcacagtttttgaaaaagacacgcct
tcgcataatttaatcgaagattgtatgcttttagctaataaagccgcagcaaaactcata
gatataggtgtttttaggaatcacttaagtgctgatgcaagaaaaatcgataagctttta
aatgaattacgcgaactaggcatcgatgtaaattttaaacccaatcttcctgaactcata
cgcgacatacaagctttatccgatgagttaaatttaagagcagaagtagataaactcatc
atcaaagcacaaaaaaaagcggaatactctagcataaatgcggggcattttggcttaggt
tttgataaatactcacattttacaagccctataagaaggtattctgatcttattttacac
agacttttaaaagccaaacaaaaaaacgatgaaaaactttttaattatctacttttaaac
atagaaagcacttgcgagagtcttagtacgcttgaaagagaggcggataaggttgctttt
gattttatggatagaaaatttgctagatgggcagctaaaaatataggcaaaaaatttaaa
gctttagttgtgcaaaatgatggagtttgcatagctaaactagatgatgaaatcaaagga
gcagatataatcctttatgatacacgtgtgaatttgctagaaagtgttgaagtgcaaatc
atggaagctgatatagttatggcaaaaatttatgctaaaatcacccaaagacttataaag
gaagaaaatgtatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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