KEGG   Corynebacterium jeikeium: jk0413
Entry
jk0413            CDS       T00255                                 
Name
(GenBank) putative helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
cjk  Corynebacterium jeikeium
Pathway
cjk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cjk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    jk0413
  09124 Replication and repair
   03420 Nucleotide excision repair
    jk0413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjk03021]
    jk0413
   03400 DNA repair and recombination proteins [BR:cjk03400]
    jk0413
Enzymes [BR:cjk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     jk0413
Transcription machinery [BR:cjk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     jk0413
DNA repair and recombination proteins [BR:cjk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     jk0413
SSDB
Motif
Pfam: Helicase_C_3 ResIII DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: CAI36570
UniProt: Q4JX87
Position
complement(496151..497731)
AA seq 526 aa
MSIGTGPLIVQSDKTVLLEIDHEQAQEARTALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVMDVLETYSRFPVPQPLLIDIADTMDRYGRLKLIKHPAHGLVLETTDRAVLTE
IRRHKKIKPMLGAEIDEDSVVVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIELSQE
HEEWQLRDYQEMAADSFWEGGSGVVVLPCGAGKTMVGAASMAKAKATTLILVTNTIAGRQ
WKDELVRRTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRKSKGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAFL
DRMSPGGLSSVPQSLRYLIDDATRAFQQGSATEPHSARVPSRVDTPQRNIMDITGDSTEI
ASEIDGAVEGFRRAHDQAIAVDPADGTKASDTRTFRSPREIMSELRRAYTAGTQVRLHYV
DYAGATSHDWISIVMMTPSTISAVLESTGESLTIQPHRIAAVDVPC
NT seq 1581 nt   +upstreamnt  +downstreamnt
gtgagcatcggcaccggccccctgatcgtccagtcggacaagacagtgctgctggaaatc
gaccacgaacaggcgcaagaggcgcgcaccgcgctggcgccgttcgcggagctggagcgc
gcgcccgagcacgtacacacctaccgcatcaccccgctggcgctgtggaacgcccgtgcc
gccgggcacgacgcggaacaggtcatggacgtgctggaaacctactcgcggttccccgtc
ccgcaaccgctgctcatcgacattgccgacacgatggatcgctacgggcgactgaagctc
atcaagcaccccgcgcacgggctcgtgttggagacgacggacagggctgtgctgacggag
atccggcgtcacaaaaaaataaagcccatgttgggcgcggagatcgacgaggactcggtc
gttgtacacccttccgagcgcggcaggctcaagcaggaactgctgaaggtcggctggccc
gcagaggatctggcgggatacgtcgacggcgaggcgcaccccatcgagctgtcgcaggaa
cacgaagaatggcagctccgcgactaccaggagatggcggccgacagcttctgggaaggc
ggctcgggcgtggtagtgctgccgtgtggtgcgggaaagacgatggttggcgcggcctcg
atggccaaggcaaaggccaccaccctgatcctggtgacgaacaccatcgcgggcaggcag
tggaaggacgagctggtgcgccgtacctccctgaccgaggacgaaatcggcgaatactct
ggagaaaagaaggagatccgccccgtgaccatcgccacctaccaggtggttacccgcaag
tcgaagggcgaataccgggcgctggagctgttcgactcccgcgactggggcttgatcatc
tacgacgaggtgcacctgctgcccgccccggtgttccgcatgacctccgacctgcagtcc
cgccgccgcctggggctcaccgccaccctggtgcgcgaggacggccgcgaaggcgacgtc
ttcagcctaatcgggccgaagcgctatgacgccccatggaaggacatcgaggccttcctg
gatcgcatgtcccccggcggtctctcgtccgttccccagtccctgcggtatttgattgac
gacgccaccagggcattccagcagggctccgccaccgaaccccactcggctcgtgtcccg
tctcgcgtggatactccccagcgcaacatcatggacatcactggggactccaccgagatc
gcctcggagatcgacggcgccgtggagggttttcgccgcgcccacgaccaggccatcgcc
gtggacccggcggacggcacgaaggcctcggacacccggaccttccgctcgccgcgggag
atcatgtccgagctgcgccgcgcctataccgcgggcacacaggtgcgcctgcactacgtg
gactatgcgggtgccaccagccatgactggatctccatcgtgatgatgaccccctccacc
atctccgcggtgctcgaatccaccggggagagcctcacgatccaaccccaccgcatcgct
gcggtggacgtgccgtgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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