KEGG   Corynebacterium jeikeium: jk1077
Entry
jk1077            CDS       T00255                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D (EC 3.1.26.3) (RNase D).,Cleaves multimeric tRNA precursor at the spacer region (By similarity).
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
cjk  Corynebacterium jeikeium
Brite
KEGG Orthology (KO) [BR:cjk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cjk03016]
    jk1077 (rnd)
Enzymes [BR:cjk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     jk1077 (rnd)
Transfer RNA biogenesis [BR:cjk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    jk1077 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: CAI37241
UniProt: Q4JVB6
Position
1269481..1270752
AA seq 423 aa
MSFISVPAAGTPLLRDTPQQIDAVSRVLAAGTGPIAIDTERASAYRYDDRAFLIQLRRHG
SGTFLIDPEAEPQATRRMAEVVNEAEWVLHAAHTDLPCLMALGWRPQVLHDTQIAGQLLG
AERIGLSGMLDAYFDIQVPKDKGNADWSRRPLTQAMLNYAALDVEWLLELLDCCLEELAK
TGRTEWYIQECQHVLASASPLSANDWTDLKGLSSLRRALPRRIAHDLWESRDAMARRGDI
SPESILRSRDLVDIAGRAERDRVGALQQLNSCLHRSRARMKPRARRHMAEQLSDALMSDT
QDIETQQFHPPHAPSKGIPDYRTWPDEYPVAAAYSDAILTAADNAANILQIRLDTIVTRR
NLRQAAWSCWLAKDTNALDIAEDPIAEWEQLLGETWTDLGLRPWQVELLLNAVAPAVVEV
SAT
NT seq 1272 nt   +upstreamnt  +downstreamnt
gtgagttttatctctgttcccgccgccggcacgccgttgctacgggataccccgcagcaa
atcgatgcagtatcccgcgtactcgccgcaggcaccggccctatcgccatagatacggag
cgcgcctctgcctaccgctatgacgatcgcgcattcctcattcagctgcgacgccacggc
tccggtacattcctgatagatcccgaagccgaaccccaagccacccgccgcatggccgag
gtcgtgaacgaagccgaatgggtgctccacgcggcgcacaccgacctgccctgcctgatg
gccctaggttggcgcccgcaagtactgcatgacacgcagattgccggacagctcctaggt
gccgaacgcatcgggctatccggcatgctagatgcctacttcgatattcaggtccccaaa
gataaaggcaacgcggattggtcgcgcagaccattgacccaagcgatgctgaactacgcc
gccttagatgtcgaatggctcctcgaactattggactgttgtctagaagagctcgccaaa
accggccgcacagaatggtatatccaggagtgtcaacacgtgcttgcctctgcctctccc
ctgtccgcaaacgactggacagacttgaaggggttaagctccctgcgccgcgctctgcct
cgccggatcgcccacgacctctgggaatcccgcgacgcgatggcccgccgtggcgacatc
tccccggagtccatcttgcgcagccgcgacctggtggacatcgctggccgcgccgaacga
gaccgcgtcggcgcgctacagcagttgaactcctgcctgcaccgctcgcgggcgcgcatg
aaacctcgggctcgcaggcacatggccgagcaactttcggacgccctcatgtccgatacc
caagatattgagacccaacagttccacccgccgcacgctccctcgaagggcatcccggac
tacaggacctggcctgacgaataccccgttgcggcggcgtattccgacgcaattctcacc
gcagccgataacgcagcgaacattctgcaaatccgcttggacacaatcgtgaccaggcgg
aatctacgccaagccgcctggtcctgttggctggccaaagacactaacgctctggatata
gccgaggacccgatcgcagaatgggagcagctactaggtgaaacgtggactgatttgggg
ctacgcccctggcaggtagagctgctgctcaatgcagtagctcccgccgtagtggaggtt
tccgcgacctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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