KEGG   Coturnix japonica (Japanese quail): 107307934
Entry
107307934         CDS       T04297                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo04510  Focal adhesion
cjo04512  ECM-receptor interaction
cjo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107307934 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107307934 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107307934 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjo04147]
    107307934 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:cjo00536]
    107307934 (COL4A1)
Exosome [BR:cjo04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107307934 (COL4A1)
Glycosaminoglycan binding proteins [BR:cjo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107307934 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107307934
NCBI-ProteinID: XP_015706908
Position
1:complement(125051528..125157540)
AA seq 1676 aa
MWRWLGFGLLLSAELSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG
PPGPPGLKGDTGEPGLPGTKGTRGPPGPSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG
ERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTP
GFQGPMGPPGIPGEPGPPGPPGPPGEKGYMGLGFQGPKGEKGEQGVQGPPGPPGPAPHMK
EKGSEIIKGEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGL
PGGFGIPGRPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGIKGQKGE
KGFPGAQGIPGIPGRPVPDMVGSPGVPGQRGEKGEKGSPGFPIPGPPGRDGFPGPPGLPG
PPGPPGVTDGIDQCQQGQPGAPGIPGPPGQHGFPGEMGEKGEKGETCTLCDKVGPPGLPG
PQGLPGPAGFPGQAGFKGDRGLPGLDGLPGVPGPPGAPGLIGRPGAKGEPGDFTYDSILK
GEKGDPGFPGQPGIPGREGIPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER
GLPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFP
GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGSPGLPGTPGTPGLDG
FPGTPGLQGQKGEPGVGLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQGF
RGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGLDMPG
PKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG
LPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLG
PTGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPG
TPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGD
KGEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAKGEKGLPGLSGIPGLKGEPGEPGA
PGPAGAIGQKGEPGYDGIPGTAGAKGEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGIP
GIPGLKGEQGYAGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG
LKGAKGEQGSDGWPGNPGGPGDKGDPGFQGLPGSPGLPGGAGEKGDLGPPGVPGVPGPKG
SAGFPGLKGERGDQGLPGILKFSINFPGLQGPPGPPGAFQLIKGDPGLPGPVGPVGLKGF
PGLPGPKGQQGVTGPSGVPGPPGSPGFDGRPGQKGEVGPYGPPGPRGIPGPPGPEGLPGA
MGPPGAASVAHGFLVTRHSQTTEEPQCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSC
LRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIRPFISRCSVCEA
PAMVIAVHSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPF
IECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRNT
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgtggcgttggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtccgcc
gcgggatgttctggttgtggaaaatgtgactgcagtggagtaaaaggacaaaagggagaa
agaggccttccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt
ccccctgggccaccagggcttaagggtgatactggagaaccagggctgccaggaacaaaa
ggaacaagaggcccaccaggaccatcaggatttccaggaaacccaggcctccctggcatt
cctggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggt
gaaagaggtccagtaggtcccccaggtttaccggggctgactgggagcataggaccccca
ggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagcgtg
ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca
gggtttcagggaccaatggggccaccagggattccaggagaaccaggtccccctgggcca
ccaggacctccaggcgaaaagggctacatgggcttgggctttcaaggtcccaaaggtgaa
aagggagaacaaggggtccagggtcccccagggccaccaggaccagcaccgcacatgaaa
gaaaaaggaagcgaaatcataaagggagaaaagggtgagccaggcgaaaagggtgaacag
ggagtcccaggattgccgggctcaggttacagaggagaaaagggtgaacctgggaagcct
ggtccacggggaaagcctggaaaagatggtgaaccaggaccaaagggagaacccggcttg
cctggagggtttgggattccaggacggcctggggaacctggtgctaagggtgaaaaaggt
gatcagggtcctcaagggcctccaggaagaattatagatgctggaccaatagatactttt
ggtgaaaaaggagatcctggagtttcaggtttgcctggaataaaaggtcaaaaaggtgaa
aaaggtttccctggtgcacaagggatcccaggaattccaggtcgaccagttccagacatg
gtaggatcacctggtgtccctggccagagaggtgaaaaaggtgaaaaggggtctccagga
ttccctatacctggacctccaggaagggatggtttcccaggcccgcccgggttgcccggc
ccaccaggtcctccaggtgtaacagatggaattgatcaatgtcagcaggggcaacccggt
gcgccaggtatacctggacctccagggcaacacggatttccaggagagatgggagagaaa
ggtgaaaaaggtgaaacctgtaccttgtgtgacaaagtaggacctcctggacttccagga
ccacagggactgccaggtccagcaggttttccgggacaggcaggtttcaagggtgacaga
ggcttacctggacttgatggccttccaggcgtacctgggcccccaggcgctccaggactc
attggccgccctggggcaaaaggagaaccaggagattttacttacgattccatcctgaaa
ggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaata
ccaggaaaggacggattgccaggtcctcaaggtccaaaaggagcatcgggtacagctggc
ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga
ggtttacctggccctcctgggataggcactgcagggctacctggtgacaaaggagacaga
ggttttgctggaaccccaggtttaccaggtcttccaggggcaaagggtgaagcgggacga
actgtaccactccctggacctcctggggcagatggccttcctggacctcctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccagggagacctggtctgccaggagaa
aaaggtgctgtcgggcagccaggtatagggtttcctggacctccaggacctaaaggcttc
cctggtcagcctggctcacctggtctgccggggactcctggaacccctggcctggatggt
tttccaggaacgccaggtttacagggtcaaaaaggtgaaccaggagtgggtctccctggt
cctaaaggattaccaggcatcccaggaccagctggcatccctggagaaaaaggaaatcct
gggctgcctggcttacgaggtgaacaagggttcccaggcgtacctggacaacaaggattc
agaggagatccaggtctccctggactacaaggcttgccaggcccccaaggctcaccagga
gtgggcccgccaggattgccagggcctgctgggcagccaggacccgaggggccaccagga
tttcctggaataaaaggagaaaggggcttccctggaatcccaggtctggatatgccaggg
ccaaaaggagataaaggtagccagggccaacccggagtaccagggtctgtggggttacct
ggcctgccaggtccacaaggatctgttggactgaaaggatcagcaggagccaaaggagaa
atgggagttatgggaactccagggttgccagggactcctggaccagttggagatcgaggg
ttgcctggtgaaaaaggtagccaaggtttcaaaggtgtggttggaccacagggcgatcca
ggtgtcaagggggataaaggtgaagctggtcttccgggaatacctggaagcatggacacc
atggacatggttagtctcaaaggccaaaaaggagatcctggagaaaaaggggaccttggt
ccaacgggagaaaaagggttacgtggggagtatggagaaccaggaattccaggaagggat
ggtgaacctggtactccgggacaaccaggaccaaaaggagatcagggccccccagggtac
ccaggagatccaggaattccaggacaaaaaggatcagttggtgaaatgggtttgccagga
acacctggagaaaagggtctgcctggaataccaggttcaccaggcacaccggggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcagcaggttttcctggaataggctttcca
ggatctcctggtgagaagggtgaaccaggaagaacaggtagtccgggtttatctggagac
aaaggtgaaaagggtaatgcaggaattccaggaatgccgggtgctccaggtcccaaagga
tcccctgggattgcaggatttccagggagcccaggcctccatggagcaaagggtgaaaaa
ggacttcctggcttaagtggtatcccaggtttaaaaggagaaccaggtgaacctggtgct
cctggtcctgctggtgccattggtcagaagggtgaaccaggctatgatgggattccaggc
acagctggtgcaaagggtgaacaaggtcttccaggtagaggacttccaggatttccaggt
gcaaagggagataaaggtgcaaaaggtgaagtgggtttcccaggatccccaggaatccca
gggattccaggtttaaaaggagaacaaggatatgctggcccaccgggccctaaaggcaac
caaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagatagaggaccc
caaggccagcctggccttccaggtttaccaggtccaacggggccaccaggacctccaggt
ctgaagggggctaaaggtgagcagggaagtgatggctggcctggaaatcctggaggtccg
ggagataaaggtgatccaggtttccagggactgccaggtagtcctggtttgccaggaggt
gctggtgagaagggtgatctaggacctccaggtgtaccaggtgttccaggtccaaaagga
tctgcaggttttccaggcctcaagggtgagcgaggcgaccaaggacttcctggaatctta
aagttttctattaattttccaggtttacaaggcccaccgggccccccaggtgcttttcag
cttatcaaaggggatcctggcttacctggcccagtaggaccagttggtctcaaaggattc
ccaggacttccaggtcccaaaggacagcaaggagtaacaggaccttcaggtgtacctgga
ccacctggtagtccagggtttgatggcagacccgggcaaaaaggagaagttggtccttat
ggtcccccaggacccagaggaatccctggtccacctggccctgaaggtttgcctggggct
atgggcccaccaggtgcagcatctgttgctcatggcttccttgttaccagacacagtcaa
accactgaagaaccacaatgcccatttggaaccaggctgatttaccatggctactctctg
ctttacgtacaaggaaatgaaagagcacatggccaagatctaggcactgcagggagctgt
cttcgtaaatttagtactatgcctttcctattttgcaacatcaacaatgtatgtaacttt
gcatcgaggaacgactattcctactggctgtccactcctgaacccatgccaatgagtatg
gcacccatcactggtgaaagtatcagaccattcatcagcagatgctctgtgtgtgaagct
cctgctatggtaatagccgttcacagtcaaacaatccagataccaccatgtcctgaaggc
tggagttccctttggattggttactcctttgtcatgcacaccagtgctggtgctgagggc
tctggccaggccctggcgtctcctggttcctgcctggaagagttccgcagcgctcccttc
attgaatgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggctt
gccactatagagaggaatgagatgttcaagaaaccgactccgtcaactctgaaagcaggg
gatctgcgctcaaacgttagccgttgtcaagtctgtatgagaaatacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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