KEGG T04297: 107312287

Coturnix japonica (Japanese quail): 107312287

Entry

107312287         CDS       T04297

Symbol

SMC6

Name

(RefSeq) structural maintenance of chromosomes protein 6

K22804

structural maintenance of chromosomes protein 6

Organism

cjo Coturnix japonica (Japanese quail)

Brite

KEGG Orthology (KO) [BR:cjo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107312287 (SMC6)
DNA repair and recombination proteins [BR:cjo03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     107312287 (SMC6)

SSDB

Motif

Pfam:

SMC_N AAA_23 T3SS_needle_E AAA_21 AAA_29 Sec10_N VP9 ABC_tran

Other DBs

NCBI-GeneID:

107312287

NCBI-ProteinID:

XP_015715060

UniProt:

A0A8C2YAV6

Position

3:complement(91360437..91389124)

AA seq 1096 aa
MGKRKEESASKPPSQKRQRQEHADERNAESSDEEHSLFAADNSFSLSSPVGEAGIIESIQ
LKNFMCHSMLGPFQFGANLNFIIGNNGSGKSSVLTALIVGLGGKATATNRGSSLKMFVKS
GATSADISVTLQNQGRDAFKPEVYGDSIIVNTHINTEGGRTYRLKSKSGNMISSKKEELL
GMLDHFNIQVENPVSVLTQEMSKLFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMKTKEN
TRLQIEQGVERLKELKRIYCEEKERYESIECVNEMQKRLEELKHKMAWAVVAEMEREIQP
IREGVKAEEENTVKFDQKLEECQIKINEAEEKCKAIQEKLITVNGEAEALHTQCMSSKAE
VQTRRKAVNEAEVLYNRVRTELKRLAKDDEQLHNRIEEMKKSAYQASEPERQERQRKITQ
LKEKLKVLHDEEIMIGQQMDQFQQAIYKHKEEFVKLKREDSVVRQDLDAKQKHLRELRDS
KTNTFKRFGQHMPSLLEEVEVAFRQGQFKHKPVGPLGAFIHPKDPELTLAIEACLKTLVQ
AFCCDNHSDERILQQLMSKYYPRGARPPIIVNKFHDKIYDVRRSGVHHPEFPSVLTALEI
DGAAVANCLINVRGIEKVLLIKSGSKAREVMQSNSPPKNCKEAFTAEGDQVFNRRYYSSD
YLRPKYLSKDVEGEISLLENEIRSQKAQLAASQQRLSSAENEIKQNESHLHHHQHYQKEL
QTKIRRTAAEIADLENVDETQYMDIRVLEDVAEENKKKMETVKQEMQEESRKMEELKKIL
QAAEERFEEIKEKMNKVEDTTNPIKDELDKADSEVENRRRHLQYYEDKKKEHLACIKKHK
ELLAAKEKELEEKTAQARQIYSERIEVSRTVKSLDAEMNRLRERIKTEKSHRGNTEEIIQ
RFLDAKERYEDANSKVNNLKKFIRLLEEIMTQRFSIYRRFLRLLSLRCKLYFDYLLRIRG
CSGRIIFDHKNETLSITVQPGEEDKHALSNVRSLSGGERSFSTVCFILSLWSITESPFRC
LDEFDVYMDMLNRRIAMDMILKVADSQCHRQFILLTPQSMSFLPVSSRIRILRLQDPERG
QRTLTFRNRNEEEDDD

NT seq 3291 nt +upstreamnt +downstreamnt
atgggtaagagaaaggaagaaagtgcttcaaagcctccatcccaaaaaaggcagagacaa
gaacacgcagatgaacgtaatgctgagtccagtgacgaagaacactcactgtttgcagct
gataatagtttctctttatcgtcgcctgtaggggaagctgggataattgaaagtatccag
ctgaagaacttcatgtgccattcgatgttggggccttttcagtttggagcaaatctcaat
tttattattggaaacaatggaagtggaaaaagttctgttttaactgcactgattgttggc
cttggaggaaaagccactgctactaatagaggttcctcattaaaaatgtttgtaaaaagt
ggagcgacttctgcagatatctcagtaacactgcaaaaccaaggcagagatgcatttaag
ccagaagtgtatggtgactctattattgtgaatacacacattaatacggaagggggcaga
acttacagactgaaaagcaaatctggtaatatgatttcttcaaagaaggaggaactctta
ggaatgcttgatcactttaatatccaggtagaaaatcccgtgtctgttttaacccaagag
atgagtaagctcttcttacagtctaaaaatgagggtgacaagtataagttttttatgaag
gcaactcagctggagcaaatgaaagaagactattcatatatcatgaaaactaaagaaaat
acacgtcttcagattgagcaaggagtagagcgtctaaaagagcttaagcgaatttactgt
gaagaaaaggaacgctatgaaagcatcgagtgtgtgaatgaaatgcagaaacgccttgaa
gaactgaaacataaaatggcgtgggcagtggtggctgagatggagagagaaatacagccg
atcagagaaggtgtcaaagctgaagaagaaaatacagtgaagtttgatcagaagctggaa
gaatgtcagataaaaataaatgaggcagaagaaaagtgcaaagcaatacaagagaagctg
ataacagtaaatggtgaagcggaagccctgcatactcagtgtatgtcttcaaaagctgaa
gttcagacaagaagaaaagcagtcaatgaagctgaggtgctttataatcgcgtcagaact
gagctgaaacgtctggcaaaagatgatgaacagctacataaccgaattgaggaaatgaaa
aagagtgcttatcaggcttcagagcctgaaaggcaggaaaggcaaaggaaaatcacacag
ctaaaggagaaactgaaggtgcttcatgatgaagaaataatgattggccaacagatggat
cagtttcagcaagctatttataagcataaagaagagtttgttaaacttaagagagaagac
tctgttgtgagacaagacttggatgctaaacagaagcacctgagagagctgagagatagt
aaaacaaacacctttaaaagatttggacaacatatgccatcactgcttgaagaagttgaa
gtagcctttaggcaagggcaatttaaacacaaacctgttggacctttaggtgctttcatt
catccaaaagatcctgaactgactctggctattgaagcttgtttaaagaccttagttcag
gcattttgctgcgacaatcatagtgatgaaagaattcttcagcaactgatgtcaaaatat
tatccacgtggagctagacctccaataattgtaaataaatttcatgataagatttatgat
gttagacgaagtggagttcatcatccagagttcccgtcagttctcacagcactggaaata
gatggtgcagcagttgctaactgtttgatcaatgtgaggggtatagaaaaggtcctccta
attaaaagtggctctaaagctcgtgaagtaatgcagtctaacagtcctccaaaaaattgt
aaagaagctttcactgctgaaggtgatcaagtatttaacagacgatattattcttctgat
tacctcagacccaagtatctaagcaaagatgttgaaggagaaataagtctcttggagaat
gaaattagaagccagaaagcacagttggcagcatctcagcaacgtttgtcttccgctgaa
aatgaaattaagcagaatgaaagtcatcttcatcatcatcaacattaccaaaaagaacta
cagacaaagatacgaagaacagcagcagagatagcagatcttgagaatgttgacgaaacc
cagtatatggacatccgtgtattagaagacgtggctgaagaaaacaaaaaaaagatggaa
actgtaaaacaagaaatgcaggaagaaagcagaaaaatggaagaactgaagaagattctt
caggcagctgaggagcgatttgaagaaattaaagagaaaatgaataaagtagaagatacc
actaatccaattaaggatgaattggacaaagcggactcagaagtggaaaacagaagacgt
catttgcagtactatgaagacaaaaagaaagagcacttggcttgcataaaaaagcataaa
gaattactagctgctaaagagaaagaattggaggaaaaaactgcacaggccaggcaaatc
tactcagagcgcatagaagtcagccgcactgtgaagagtcttgatgcagaaatgaatcgc
ttgagagagaggataaagacagaaaaaagtcaccgtggaaacacagaagaaataatacag
cgatttcttgatgcaaaggagagatatgaggatgcaaacagtaaagtaaataacttaaag
aaatttattaggctgctggaagaaataatgacacagagattcagcatatatcgtcggttc
ttaaggctcctttctttacgatgcaaactgtactttgactacttgctgcgcattcgaggt
tgcagtggaagaataatatttgatcacaaaaatgagacactttcaataacagttcaacct
ggagaggaggacaaacatgccctgagcaatgtgagatctttatcaggaggcgaacgttcc
ttctcaacagtttgtttcattctttccctatggtcaattactgaatctcctttcagatgc
ctggatgaattcgatgtctacatggatatgctgaacagaagaattgcaatggatatgatt
ctgaaagtggctgactctcagtgtcatcggcagttcattttgctcaccccacaaagcatg
agttttctgcctgtgagttcccgtattcgtatcctccgattgcaagaccccgaaagaggc
caaaggacattgacgttccgtaataggaatgaagaagaagatgatgattaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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