KEGG T04297: 107320139

Coturnix japonica (Japanese quail): 107320139

Entry

107320139         CDS       T04297

Symbol

TCOF1

Name

(RefSeq) treacle protein isoform X1

K14562

Treacher Collins syndrome protein

Organism

cjo Coturnix japonica (Japanese quail)

Pathway

cjo03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:cjo00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107320139 (TCOF1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cjo03009]
    107320139 (TCOF1)
Ribosome biogenesis [BR:cjo03009]
Eukaryotic type
  90S particles
   Other 90S particles
    107320139 (TCOF1)

SSDB

Other DBs

NCBI-GeneID:

107320139

NCBI-ProteinID:

XP_015731208

Position

13:4902241..4924300

AA seq 1040 aa
MAALSGGRRELLALIHQHLMRAGFARAARELQAQLGQKLLPSLATTLEEIFTHWERTPSK
ARRRKLTDEEVAIPEKIRVPDPVSSSESSEKEEDEKEKAKTGNATGVSPVTNSAVNVESS
EDDDSSSEEETLSGKGAVTVTPAVASGKAANSLHSPVKPAAPGSKVAVPSAANRTVLSNK
QQPSASVVTPAKAGQKLPGPGKPGGAVAAVSQAGQSKAPIITKAPESSSSSSSSSESEEE
KETPTVKTPAPKVELKQAAGKAESSSEESSDETSSEEELATTAVQSASQFPVPPVKAVQV
NSTPVKTAPATSVSSKKSTVKQSTVTLNQTKPGSVTVPVAAKPDDTSESSDSSDSGNEEP
PSVTQSKPSLKTSQAIPSPVKTTPAASLSSKATPAKTPSLSQGKPASKPAVLKQAKATPG
RTAAPAKPAESTNPAESTDSSGSEEEDLPVPVSQKRLSEQTGPVPNLSQAAKAVTSEKAG
GSTLKNETSESGSSDSSDSEEETPVSQTQPALPAVKSNAVPQPTSVKKVPAPTPAPAPSL
PMDSSDDSSGESDSDEEVVPPTQTLSQQNIKPTKVSSTVAAKANATTPSGKGIKAPPIPS
VSRVSESSNSDSSESDTEAGEAFPPPCLKETAPIGKPPPASPATPQAASILRSPTAKSKK
PGLQPVQDARLSQTAPLTQAEESSDSSSSSDSEKETPKQPPKPGMLQKPGKTEPDDSSLS
ESSDDEEAVSQSLLTGYMSLSKSPAAPQAPKTVPPQPVGNTGQGKAAVNATSSLAKVSVK
AAPADSSSSDSSDSDTDIEQVSANHKAESKPSPGQEATGTSNKEKGAGKTDANHANPKPS
SVKKAVANKENDVEAKGTQANPLPSALLTTPQPVQSSLENKSEVTSAAGVPAVQTPDGLE
EKKKKKKEKKEKKEKKKPSSTADKAVKTAKGKDKENKKQKASQKRKHPGEDGAVGQPKEK
KRKGQGNEEVPKKKKKKAADDQEKLPGSKEKKKSSKKKKTGKEKKNKKMPTEGESTADGS
AEVHKKKKKKKKTAEPEGLL

NT seq 3123 nt +upstreamnt +downstreamnt
atggcggcgttgagcggcgggcggcgggagctgctggccctcatccaccagcacctcatg
agagccggcttcgctcgggccgcacgggaactgcaggcacagctgggacagaagctgctc
ccgtcactggccacgacgctggaggagattttcacccactgggagagaactccttccaaa
gccaggagaagaaagctgactgatgaggaggtggccatcccagaaaagattagagttcct
gatcccgtgagcagctctgaaagctcagagaaagaagaggatgaaaaagagaaggcaaaa
actggaaatgcaactggcgtttccccagtcacaaactcagcagtgaatgtagaaagcagt
gaagatgacgactcttcatcagaagaggaaacgctgagtggaaaaggtgcagttacggtg
acaccagctgtagcgagtggcaaagctgccaactccttgcattctcctgttaaacccgct
gctccaggaagtaaagtagcggtgccctctgctgcaaacagaactgtgctctcaaataag
cagcagcccagtgcatcagttgtgaccccagccaaggccgggcagaaactgcctggtcct
gggaaacctggaggagctgtagcagctgtgagccaagcaggacaaagcaaagctcctata
attaccaaagcaccagaaagctccagcagcagcagcagctcatcagagagcgaggaggaa
aaggagacgccaactgtgaagaccccagcccccaaagtggagctgaagcaggcagctggg
aaagctgagagcagcagtgaggaatcaagtgatgagacatcgtctgaggaggagcttgcg
accacagcagtgcagagtgcatcacagtttccagttcctcctgttaaagcagtgcaggtt
aattcaacacctgtaaaaactgcacctgctacttcagtgtcctccaagaaaagcacggtg
aagcaaagcacagtgacactgaaccagaccaagcctggctctgtaacggttccagtggct
gcaaagcctgatgacacctcagagagcagcgactcatcagacagtggaaacgaggagcct
ccatcagtaacccagtcaaagccatctttaaaaacctcccaggccatcccatccccagtg
aaaaccacaccagcagcatcactctccagcaaagcaactccagcaaaaacaccttcactg
tcccaagggaagccagcatcgaaaccagcagtgctaaagcaggctaaagccacaccagga
aggactgctgctcctgcaaagccagctgaaagtacaaacccagcagagagcactgactct
tcaggcagtgaagaggaggatctgcctgtgcctgtcagccagaagaggttatcagaacag
actgggcctgttcccaacctgagccaggctgctaaagccgtgacttctgaaaaggcagga
ggaagcaccttaaagaatgagacctctgaaagtggaagcagtgactcgtctgacagtgag
gaggagactccagtatcacagacacagcctgcactgcctgctgtgaaaagcaatgctgtg
ccccaaccaacaagtgtgaagaaagtaccagctcccacaccagccccagccccttctctg
cctatggacagcagtgacgactcgagtggggagtcagattctgatgaggaagtagtcccc
cctacacagactctgtcccagcagaacatcaaaccaaccaaggtttcaagcacagtggct
gcgaaagctaatgccacaacaccttcagggaagggaataaaagcaccccctatcccttca
gtttccagagtgtctgagagctcaaacagtgattcctcagagagtgacacagaagcagga
gaggcttttcctcctccttgcctgaaagagacagctcccatagggaaacctcctccagcc
agccctgctaccccacaggctgcttccatcctgagaagtcccactgccaagtcaaagaag
ccaggcctgcagccagtacaggatgccaggctgagccagactgcaccactcacccaagca
gaggagagctcagacagcagcagttcctctgacagcgagaaggagacacccaagcagcct
cccaaacctgggatgctgcagaaaccaggaaagactgagccagatgacagctccttgtca
gagtccagtgatgatgaagaggcagtatcacagtccctcctcacaggttatatgagcctc
tccaagagcccagcagcacctcaagcaccaaagacggttcccccccagcctgtaggcaac
acagggcaagggaaagcagctgtgaatgccactagctccctcgccaaagtctctgtgaaa
gcagccccagctgacagctccagcagtgacagcagtgactctgacacagacatcgagcag
gtgtctgcaaaccacaaagcagaaagcaaaccctctccaggccaggaagccacagggaca
tccaacaaagagaagggggcaggaaaaactgatgcaaatcatgccaaccccaaaccttcc
tcagtcaagaaagccgtggctaacaaagagaacgatgttgaggcaaaagggacgcaagca
aacccattgccatctgcactgcttacaaccccacagccagtgcagtcgagtttggagaac
aaaagtgaggtcaccagtgctgctggagttcctgcagtgcaaacaccagacgggttggaa
gagaaaaagaagaaaaaaaaagagaaaaaagaaaagaaggagaagaagaaaccttcctcc
acagcagacaaggctgtgaaaacagctaagggcaaagacaaagagaacaaaaaacagaaa
gcatctcagaaacggaaacatccaggagaggatggagctgttgggcagcccaaggaaaag
aagaggaaagggcaaggtaatgaagaagtgcccaaaaagaagaaaaagaaagcagctgat
gaccaggagaagctgccaggaagcaaggaaaagaaaaagtcaagtaaaaagaaaaagacg
ggaaaagaaaagaagaacaaaaagatgcccacagaaggggagtcgacagcagatggctct
gctgaagttcacaagaagaagaagaagaagaagaaaacagctgagccggaaggattgttg
tga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
All databases (20)   

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