KEGG   Coturnix japonica (Japanese quail): 107321286
Entry
107321286         CDS       T04297                                 
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03082  ATP-dependent chromatin remodeling
cjo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107321286 (SMARCB1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107321286 (SMARCB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cjo01009]
    107321286 (SMARCB1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjo03021]
    107321286 (SMARCB1)
   03036 Chromosome and associated proteins [BR:cjo03036]
    107321286 (SMARCB1)
Protein phosphatases and associated proteins [BR:cjo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107321286 (SMARCB1)
Transcription machinery [BR:cjo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107321286 (SMARCB1)
    SWI/SNF complex
     107321286 (SMARCB1)
Chromosome and associated proteins [BR:cjo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    107321286 (SMARCB1)
   PBAF complex
    107321286 (SMARCB1)
   SWI/SNF complex
    107321286 (SMARCB1)
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 107321286
NCBI-ProteinID: XP_015733521
UniProt: A0A8C2Y9F1
Position
15:7050063..7059691
AA seq 386 aa
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgatgatgatggcgctgagcaaaaccttcgggcagaagcccgttaagttccagctggag
gaggacggagaattctatatgatcggctccgaggtggggaattacctgcgtatgttccgg
ggctctctgtacaagaggtatccctcgctctggagacgattagccacagtagaagaaagg
aagaagatagtggcatcttcacatgaaaatcagcggtctcacagtccaagaagatatcat
ggatatacaacattagccaccagtgtgacactgttaaaggcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcagtgtctatcagcacagaacctcccacctac
ctcagagaacagaaggcaaagaggaacaaccaatgggtgccgacactgcccaacagctct
catcacctggatgcagtaccatgctcaacaaccattaacagaaatcgcatgggcagggac
aagaagaggactttccctctgtgctttgatgaccatgacccagcagtcatccatgagaac
gcatcccagccggaggttctggttccaatcaggcttgatatggaaattgatggacagaaa
ctcagagatgcatttacatggaacatgaatgaaaagctgatgaccccagaaatgttctca
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcctct
gccatccgacaacagattgaatcatacccaactgacagcatcctagaggatcagtcagac
cagcgtgttattattaagcttaacatccacgtagggaacatctcccttgtagaccagttt
gaatgggacatgtcagagaaggagaattcaccagagaagtttgccttgaagctgtgctca
gagcttggcctgggtggggagtttgtcactactattgcctacagcatccggggacagctg
agctggcatcagaagacatacgccttcagtgagaaccctttgccgactgtggaaatcgcc
attcgcaacacgggggatgctgaccagtggtgccctcttctggaaaccctcacagacgct
gagatggagaagaagatcagagatcaggacagaaatacgaggcgcatgagacgcttggcc
aacactgctccagcctggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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