KEGG   Campylobacter jejuni subsp. jejuni 35925B2: UC78_0464
Entry
UC78_0464         CDS       T03745                                 
Symbol
rpoBC_1
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
cjq  Campylobacter jejuni subsp. jejuni 35925B2
Pathway
cjq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cjq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UC78_0464 (rpoBC_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjq03021]
    UC78_0464 (rpoBC_1)
   03400 DNA repair and recombination proteins [BR:cjq03400]
    UC78_0464 (rpoBC_1)
Enzymes [BR:cjq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     UC78_0464 (rpoBC_1)
Transcription machinery [BR:cjq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     UC78_0464 (rpoBC_1)
DNA repair and recombination proteins [BR:cjq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      UC78_0464 (rpoBC_1)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RnfC_N
Other DBs
NCBI-ProteinID: AJP34967
Position
446886..451013
AA seq 1375 aa
MLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLDNGESGIEKVFKSIFPIHDP
QNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHEKDEKTGEKVGVKDIKE
QEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESSTVANKLVYTAQIIPDR
GSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGYKKQDIIKLFYPIQTIHVKKDKFLTE
FNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDGLKWIEYPVEILLNRYLANP
IIDKESGEVLFDSLTLLDESKLAKIKEQKSFDIANDLANGVDAAIINSFAQDGETLKLLK
QSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVNDLFFNPERYDLTKVGRMKMNHKLG
LEVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHLGNRRIRSIGELLANELHLGLAK
MQKAIRDKFTSLNADLDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKR
RLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVE
APYRKVVNGKVTNEVVYLTATQEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARRE
EVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQII
ARDAWEAVKAKRGGVVEKVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVK
KGDIVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVH
IYEKEIEARELKDGIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGE
VKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKE
KMALEKEHHDRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRF
TLTTLIKAYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYI
ATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILE
SHLGLIGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSIPRLASEKEFIKSLSDEELLNY
ARDWSKGVKFATPVFEGVNIEEFSKLFEMAKIDMDGKTELYDGRTGEKIAERVHVGCMYM
LKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLT
IKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
NT seq 4128 nt   +upstreamnt  +downstreamnt
atgttagataataaattaggaaatcgtttaagagtagacttctcaaacatttcaaaacaa
atagaaatcccaaatcttctacaattacaaaaaaagagttttgattattttttaaatctt
gataatggtgaaagtggtatagaaaaagtttttaaatcaatttttcctattcatgatccg
caaaatagattgagtcttgaatatgttagtagtgaaataggcaagccaaaatataccatt
cgcgaatgcatggaaagaggtttgacttattctgtaaatttaaaaatgaaaatccgtctt
actctgcatgaaaaagatgaaaaaacaggggaaaaagttggcgtaaaagatattaaagaa
caagaaatttatatccgcgaaattcctttaatgacagatcgtgtatcttttatcattaat
ggggttgagagggtggttgtaaatcaattacatagaagccctggtgttatttttaaagaa
gaagaaagttcaacggttgcaaataagcttgtttatacagcacaaattattcctgatcgt
ggttcgtggctttattttgaatacgatgccaaagatgttttgtatgtaagaatcaacaag
cgtagaaaagttcctgtaactatgctttttagagctttagggtataaaaaacaagatatt
attaagttgttttatcctattcagactatacatgtgaaaaaagataaatttttaacagaa
tttaatccaaatgattttatggatagaatagaatatgatattaaagatgaaaaaggaaaa
atcgttcatcaagctggaaaaagacttacaaagaaaaaagcagaacagcttattaaagac
ggtttaaaatggatagaatatcctgtagaaattttacttaatcgttatttagcaaatcct
attattgataaagaaagtggagaggttttatttgattctttaactttgttagatgagagt
aagcttgctaagattaaagagcaaaaaagttttgatatagcaaatgacttggctaatggc
gttgatgcagcgattattaactcctttgctcaagatggagaaactctaaaacttcttaaa
caaagtgaaaatatcgatgatgaaaatgatttagctgcgattagaatttacaaagttatg
cgcccaggtgaacctgtggtaaaagatgcagcgaaggcttttgtaaatgatttattcttc
aatcccgaaagatacgatcttaccaaggtaggtcgtatgaaaatgaaccataagttaggt
cttgaagtgcctgagtatgttactgttttgactaatgaagatattattaaaactgcaaaa
tatttaattaaagtaaaaaatggtaaaggacatattgatgatagagatcatttaggaaat
cgtcgtatccgttctataggtgaacttttagccaatgaacttcatttaggtcttgcaaaa
atgcaaaaggcgatcagagataaatttacttctttaaatgcggatcttgataaagtaatg
ccttatgatttaatcaatcctaaaatgattactacaactatcattgaattttttacagga
ggtcagctttcgcaatttatggatcaaaccaaccctttaagtgaggttactcataagcgt
cgtttatcagcgcttggtgaaggtgggcttgtaaaagaaagagcaggttttgaagtgcgt
gatgttcacgcgacacattatggtagaatttgtccagttgaaacacctgaaggtcaaaat
attggtttgattaacactctttctacttatgcaaaagtaaatgaacttggctttgttgaa
gcaccatatagaaaagttgtaaatggtaaagtgactaatgaagttgtttatcttacagca
acacaagaagaaggcttatttatcgcaccagcttcaactaaggttgatgctaaaggcaat
atagtagaagaatttgttgaggctagacaagatggtgaaactatacttgcaagacgcgaa
gaagtgcaattaatcgatctttgctcaggtatggttgttggggttgcggcttctttgatt
ccgtttttagagcatgatgatgcaaacagagcgctaatgggttcaaacatgcaacgtcaa
gctgtgccacttcttactgcttcagctccgatagtaggaacaggtatggaacaaattatt
gcgcgtgatgcttgggaagctgttaaagcaaagcgtggcggtgtggttgagaaagtggat
aataaaagcattttcattttaggtgaagatgataaaggtccatttattgaccattacact
atggagaaaaatttaagaaccaatcaaaatacaaattatattcaacatcctattgttaaa
aaaggtgatatagtaaaagcaggacaaattatcgcagatggtccttctatggatcaaggc
gaacttgctataggtaaaaatgctttaatcgcttttatgccttggaatggttataactat
gaggatgctatagttgtaagtgagagaattattcgtgaagatacctttacaagtgtgcac
atttatgaaaaagaaattgaagcaagagaactaaaagacggtatagaagaaattaccaaa
gatatcccaaatgtaaaagaagaagatgttgcgcatcttgatgagagcggtattgcaaaa
attggtacccatatcaaaccaggcatgattttggtgggtaaggtttctccaaaaggtgag
gttaaaccaactcctgaagaaagacttttaagagcgatttttggagaaaaagcaggacat
gttgtgaataaatcactttatgcaaccgcttctttagagggtgttgttgtggatgttaaa
attttcactaaaaaaggctatgaaaaagatgatcgcgcaataaaatcttatgataaagaa
aaaatggctttagaaaaagaacatcatgatagacttttgatgatggatagagaagaaatg
cttcgtgtttgtgctcttctttccaaagcccctttaaatagtgatcaaaaaattggagat
aaaaattataaaaaaggacaaaccgcagatattagcgaacttgaaaaaatcaatcgtttt
actttaacaactttgattaaagcttattctaaagagattcaaaaagaatacgatgattta
aaaaatcatttccaaaatgagaagaaaaaattaaaagcagaacacgatgaaaagcttgaa
attttagaaaaagatgatattttaccaagtggggtaattaagcttgttaaagtttatatt
gctacaaaaagaaagcttaaagtcggtgataaaatggcaggacgtcacggaaacaaaggc
atagtttcaactatagttcctgaagtggatatgccttatttaccaaatggtaaaagtgtg
gatattgcacttaatccacttggcgttccaagtcgtatgaatataggccaaattttagaa
agccatttgggtttaattggacttagactcggagatcagattcaagaaatttttgacaga
aagcaaaaagattttcttaaagaattaagagcaaaaatgcttgaaatttgttctattcca
agacttgcaagcgaaaaagaatttattaaaagcttaagcgatgaagagcttttaaactat
gctagagattggagtaaaggagttaaatttgctactcctgtttttgaaggtgtaaatata
gaagaatttagcaagctttttgaaatggctaagatagatatggacggcaaaacagaactt
tatgatggacgcacgggtgagaaaatcgcagagcgtgttcatgtaggatgtatgtatatg
ctaaaactccaccacttggttgatgagaaagttcacgcaagaagtacaggaccttatagt
ctagttacccagcagcctgtgggtggtaaagcactctttgggggacaaagatttggagaa
atggaagtttgggcacttgaagcttatggagcggctcatactttaagagaaatgttaact
atcaaatcagacgatgtagaaggtagatttagtgcttataaagcattgacaaaaggtgaa
aatgttccagcaacgggaattcctgaaacattttttgtattaaccaatgagcttaaatct
cttgctttagatgttgagatttttgataaggatgaagataatgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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