KEGG   Campylobacter jejuni RM1221: CJE0818
Entry
CJE0818           CDS       T00227                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cjr  Campylobacter jejuni RM1221
Pathway
cjr03030  DNA replication
cjr03430  Mismatch repair
cjr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cjr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CJE0818 (dnaE)
   03430 Mismatch repair
    CJE0818 (dnaE)
   03440 Homologous recombination
    CJE0818 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjr03032]
    CJE0818 (dnaE)
   03400 DNA repair and recombination proteins [BR:cjr03400]
    CJE0818 (dnaE)
Enzymes [BR:cjr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CJE0818 (dnaE)
DNA replication proteins [BR:cjr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CJE0818 (dnaE)
DNA repair and recombination proteins [BR:cjr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CJE0818 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Other DBs
NCBI-ProteinID: AAW34603
Position
750686..754288
AA seq 1200 aa
MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGNMFGAIDFYQTMKAQGL
KPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMYLSSQSYIKGLYYYPRINK
KLLEDYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGYEAAKEAALWYKKVFKDDFYF
EIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTFKERAAAHEVFMCIAMGKKLNDP
DRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIAQKCNLELNLGNPTPPNFKFTREYA
KDHNIILPEETKEFSFDNDDMVFEELCKKGLKERLKFIDESKHEEYKQRLEVEINIIKNM
KFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAGSLVSYCLRITDLDPIPYSLLFERFLNPE
RVSMPDIDVDFCQDRRAEVIDYVIDKYGADKVAQVITFGKLLAKGVIRDVARVCDMSIQD
ADELAKLVPEELKITLDAAYEKEPKIKEFIDRHPKGPEVWEYARALEGLNRNAGMHAAGV
VISNESLWKKTPLFRQSKNDERHLVTQYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIK
KRYNKDIIWETIDVNDSKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLAL
YRPGPMESGMLDDFIDRKHGLKNIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSL
GGADVVRRAMGKKDPEKMKKLKTDFADGAEKQGYDRVKAEDLWELIVKFAGYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIRE
FSALEQDGKDAIIYGLGAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLE
SLIKAGAFDEFGFTRKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPK
NEEFEVMEKLGYEKEILGIYVSGHPLDRFYEQINAIDYVKSLEFEGLKNNGEILSIGKIE
DFKSMMSKNNKRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAE
GGEKPSFFLKAIKDLQSLEDGEIKAIKKFGTKKDFKNKEENHFTAEPKEFEKNIIELDLT
RLNRELIYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgagtcaatttacacacttgcatttacatacagaatattctttgcttgatggagccaat
aagcttaaagaattagctttgactttaaaagagcagggtgctacaagtgttgctatgaca
gatcatggaaatatgtttggggcaattgatttttatcaaacaatgaaagcacaaggttta
aaacctatcattggtatggaagcgtatttacataatcacgatgaattagatgataaaagt
tctcgtcagcgttttcacctttgtttgtatgcaaaaaatgagatcggatatcaaaattta
atgtatttaagttctcaaagttatattaaaggtttgtattattatccgcgtatcaataaa
aagcttttggaagattatagcgaaggtcttatttgctcttctgcttgcttgcaaggtgaa
gtaaattggcacttaaatacttatagtgaaagaaatgtgcgttttggtgcaaaaggctat
gaagcagcaaaagaagcggcattatggtataaaaaagtttttaaagatgatttttatttt
gaaatcatgcgtcatggtataggcgatcaaagaatgatagatgatgatattatcagactt
tctaaagaattaaatataaaaatcattgctacaaatgatacgcattacacttttaaagaa
agagcggctgcccatgaggtttttatgtgtatagccatgggaaaaaaacttaacgatcct
gatagaatgcgtcatagtgtgcatgaattttatgttaaaagtcctgagcagatgagtgag
ctttttgcagatattccagaagctatagaaaatacacaagaaatcgcacaaaaatgtaat
ttagagcttaatcttggcaatcccactccaccgaattttaaatttacaagagaatatgct
aaagatcataatattatcttacctgaagaaacaaaagaatttagctttgataatgatgac
atggtttttgaagaactttgtaaaaaaggacttaaagagagattaaaatttatcgatgaa
agtaagcatgaagaatacaaacaaagacttgaagtagaaattaacatcattaaaaatatg
aaattttcaggttatatgcttattgttcatgattttattaaagtggctaaggataaaggt
attccagtaggccctggaagaggatcagctgcaggaagtttggtttcttattgtttaagg
attacggatttagatcctattccttatagtctactttttgagcgttttttaaatcctgag
cgtgtgagcatgcctgatattgatgtggatttttgtcaagacagacgtgctgaagtgatt
gattatgtgattgataaatatggagcggataaggttgcacaggtgattacctttggtaaa
cttttggctaaaggggtgattcgtgatgtggctagagtttgtgatatgagtattcaagat
gctgatgaacttgctaaacttgtgcctgaagagcttaaaatcactcttgatgctgcttat
gaaaaagaacctaaaatcaaagaatttatcgatcgtcatcctaaaggtcctgaagtttgg
gagtatgcaagagctttggaaggattaaatcgcaatgctggtatgcacgcagcgggtgtt
gtaatttctaatgaaagtttatggaagaaaactccgctttttagacaaagtaaaaatgat
gaaagacatttagtaacgcagtactctaaagatcatttagaagatgtggatttgataaaa
tttgactttttaggtcttaaaactttaacagtaattaataatgcaatcaagcttattaaa
aagcgttacaataaagacattatttgggaaactatagatgtaaatgatagcaaggtttat
aaaaccatacaaagtggaaatactttagggatttttcaaatcgaatcaggcggtatgcaa
agcttaaatgcacgcttaaaaccagagcgttttgaagatatcattgcggttcttgcgctt
tatcgtccaggccctatggaatcaggaatgcttgatgattttatcgatagaaagcacggt
ttaaaaaacatagaatatccttttgacagtttagaaaaggttttagaacctacttatggg
gttattgtttatcaagaacaggttatgcaaattgttcaaattataggtggcttttcttta
ggaggtgctgatgtagtgcgtcgtgctatgggtaaaaaagatcctgagaagatgaagaag
cttaagactgattttgcagatggagcagaaaaacaaggatatgatagagtaaaagctgaa
gatttatgggagcttatcgtaaaatttgcaggatatggttttaataaatctcactctgcg
gcttatgcgttgattacttttcaaacagcttatttaaaaacttattaccctagtgaattt
atggcagcgcttttaacaagcgaagaaaacaatgtggataaaattgctgtttatattgat
gagatgaaaaaaatgaatattaaacttttacctccatcgattaacaaagcgatccgtgaa
tttagtgctttagagcaagatggcaaggatgctattatatacggacttggggctataaaa
agtgtgggtattcctgcagttgaaaatttacttgaagcaaggcaagatggagaatttaag
gatattaatgatttcttaggtaagatagatcctaccaagataaaccgtagaacattagaa
agtcttattaaggcaggggcttttgatgagtttggttttactagaaaagctttgtttgat
aatatggaaaatcttagcgaagcatcgcgtaaaatggctgaagtaagaaaaaatgctgca
agttctctttttggtgaagaggagttaacttcaggtgttcaagtaaattttactcccaaa
aatgaagaatttgaagtgatggaaaaattgggatatgaaaaagaaattttaggaatttat
gtttcaggccatcctttagatcgattttatgaacaaattaatgccatagattatgttaaa
agtttagagtttgaaggtttaaaaaacaatggagaaattttaagtataggtaaaattgaa
gattttaaatctatgatgagtaaaaataataagcgttatggtagaattgaaattttggat
tattattcttcgtttgatgctactgtatttgaaagtaatgtagaagaaatagaaaatatc
attaaagatgaaaatttgaaaaataatgcttatggttttgtattgggatttaaagctgaa
ggaggggaaaagcccagcttttttttaaaagcaattaaagacttgcaaagtcttgaagat
ggtgagattaaagctataaaaaaatttggcacaaaaaaagattttaaaaataaagaagaa
aatcattttaccgcagaacctaaggaatttgaaaaaaatatcatagagctagatttgaca
aggttaaatagagaattaatctatgaaattcatgaaattgctagaaatgcacataatcct
aatgaaaaaaataataaaaaacttgttttaaaagttattagcgcgggatcttgcctgctt
tatcatacagattttattatctctgatagtatagtagaggaaatttctaataaatatgct
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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