KEGG   Comamonas kerstersii: B5M06_12065
Entry
B5M06_12065       CDS       T04758                                 
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cke  Comamonas kerstersii
Brite
KEGG Orthology (KO) [BR:cke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cke03009]
    B5M06_12065
Enzymes [BR:cke01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     B5M06_12065
Ribosome biogenesis [BR:cke03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    B5M06_12065
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 RrnaAD Met_10 Methyltransf_25 TRAM Methyltransf_23 MTS PCMT
Other DBs
NCBI-ProteinID: AQZ99952
UniProt: A0A1V0BJA9
Position
2578967..2580472
AA seq 501 aa
MSDQNDKLSPDSNYVDMPAGDPSLPEGWLEVISMDMEAKGVARKPDGKVVFIDGALPTEL
VTANVHRKKNNWEAASLLEVKRESSQRVQPGCPHFGLHEGACGGCKMQHMHVSAQVAIKQ
RVLEDNLWHLGKVKPETMMRPIEGPTWGYRFRARLAVRYVIKKGKVLVGFHERKSRYIAD
METCKVLPPHVDAMLLPMRELIASMDARETCPQIEVACGDHVTALVLRHLEPLSDADKQR
LRDFGKQYDVQWWLQPKGPDTVHLMDAPTAQLSYSLPDFGITMPFKPTDFTQVNPHINRV
LVSKALRLLDARKDERVIDWFCGLGNFTLPIATMAREVLGIEGSDALVQRSHENYAANNA
QRVEGDKLAPTTFVGRNLFNMTPELLMADGNADKWLVDPPREGAFALSKALADIHQIRIG
AKQTGVATEEQPDLLPPLPEGHENWQFPKRIVYVSCNPATLARDAGLLVHQAGYRCVAAG
VVNMFPHTAHVESMAVFERAE
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgagtgaccagaacgacaagctttcccccgattcgaattacgtagacatgcctgctggt
gatcccagcctgcctgagggctggctggaagtgatctccatggacatggaggccaagggt
gtggcccgcaagcctgatggcaaggtggtgttcatcgatggcgccttgcccacagagctg
gtcacggccaatgtgcaccgcaagaaaaacaactgggaggcagccagcctgctggaagtc
aagcgcgagtcttcgcagcgtgtacagccaggctgcccccactttgggctgcacgaaggt
gcctgcggtggctgcaagatgcagcacatgcatgtcagcgcccaggtggcgatcaagcag
cgcgtgctggaggacaacctgtggcacctgggcaaggtcaagcccgagaccatgatgcgc
cccatcgaggggcccacctggggctatcgcttccgcgcccgtctggcagtgcgctatgtc
atcaagaagggcaaggtgttggtgggcttccacgagcgcaagagccgctacatcgccgac
atggaaacctgcaaggtgctgcccccccatgtggacgccatgctgctgcccatgcgcgag
ttgatcgccagcatggatgcacgcgaaacctgcccccagattgaagtggcctgcggtgac
catgtcacggccctggtgctgcgccatctggagccgctgagcgatgcagacaagcagcgc
ctgcgtgactttggcaagcagtacgacgtgcagtggtggctgcagcccaaggggccggac
accgtgcacctgatggatgcgcccacagcgcagctgtcgtacagcctgcctgactttggc
atcaccatgcccttcaagcccacggactttacgcaggtcaacccgcacatcaaccgtgtg
ctggtgagcaaggctctgcgtctgctggatgccaggaaggacgagcgcgtgatcgactgg
ttctgtggtttgggtaacttcaccctgcccattgcgaccatggcgcgcgaagtgctgggt
attgagggctcggatgcgctggtgcagcgttcgcacgaaaactatgctgccaacaatgca
cagcgtgttgaaggtgacaagctggcccccaccacctttgtgggccgcaatctgttcaat
atgacacctgagttgctgatggcagacggcaatgcggacaagtggctggtagacccaccc
cgcgaaggtgcgtttgcactgtccaaagcgctggcagatattcaccagatccgtattggc
gccaagcagaccggcgtggctactgaagaacagcctgacttgctgccgccattgccggag
ggccacgagaactggcagttccccaagcgcatcgtctatgtgagctgcaatcctgccacc
ctggcgcgcgatgcaggcttgctggtgcaccaggcgggctaccgctgcgtggctgcgggg
gtggtgaacatgttcccgcatacggcacacgtggagtccatggccgtcttcgagcgcgct
gaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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