KEGG   Caldicellulosiruptor acetigenus I77R1B: Calkr_1097
Entry
Calkr_1097        CDS       T01356                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cki  Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Calkr_1097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cki03400]
    Calkr_1097
Enzymes [BR:cki01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Calkr_1097
DNA repair and recombination proteins [BR:cki03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Calkr_1097
    RecFOR pathway proteins
     Calkr_1097
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 Sigma54_activ_2 AAA_3 nSTAND3 Sigma54_activat AAA_14 DUF815 AAA_16 TsaE RNA_helicase NB-ARC AAA_22 MCM AAA_18 Rad17 Parvo_NS1 AAA_17 AAA_28 NTPase_1 AAA_2 AAA_24 Bac_DnaA ResIII NACHT AAA_19 IstB_IS21 ATPase_2 ABC_tran KAP_NTPase Torsin RsgA_GTPase AAA_25
Other DBs
NCBI-ProteinID: ADQ40605
UniProt: E4S662
Position
1157074..1158090
AA seq 338 aa
MERLLDNKFSVEDVHEESLRPKTLEDYIGQQKVKEKIKIFIEAAKKRKEPLDHVLLYGPP
GLGKTTLANIIANEMGVDIKVTSGPAIERAGDLVAILTNIGENNILFIDEIHRLNRTIEE
VLYPAMEDKKVDIVIGKGPSAKTIRLTLPPFTLIGATTRAGLLSSPLRDRFGIIERLDYY
TVEELSQIVMRSASILKCDIEKEACIEIAKRSRGTPRVANRLLRRLRDYAMVKHTGSITY
EVAKSGLEMFEVDEYGLDLVDRNILEAIVYKFGGGPVGLSTIAAAIGEDEGTIEDIYEPY
LIQEGFLVKTARGRVATQKAINHIAKIKFRVKESGDKR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggagagattactggataataagttttctgttgaggatgttcatgaggagtcattaagg
ccaaagacacttgaagattatataggccagcaaaaagtgaaagaaaaaataaaaattttt
attgaagctgccaaaaaaagaaaagaaccgcttgaccacgtactcttgtatggtccaccc
ggtcttggaaaaacaacattggcaaacatcattgcaaatgagatgggagttgatataaaa
gtaacatctggccctgcaatagaaagagcaggcgaccttgttgctattcttacaaatatt
ggtgaaaataatattctattcattgatgaaattcacagattaaacaggacaatcgaagag
gttttatatcccgcaatggaagacaaaaaggttgacattgtgattggcaaaggtccgtcc
gctaagaccataagattgactttgccaccttttacactcattggagcaacaacaagggca
ggtcttttatcatcgccgctgagagacaggtttggaataatagaaaggcttgactactac
acagttgaagagctgagccaaattgttatgaggtctgccagcattttaaagtgcgatata
gaaaaggaagcatgcatagagattgcaaagcgctcaagaggaactccaagagttgcaaac
aggctacttagaagacttagagattatgctatggtaaagcacacaggaagtataacatat
gaagttgcaaaaagtggtcttgagatgtttgaggtggacgaatatggacttgaccttgtt
gacagaaacattttagaagcgatagtttacaagtttggcggaggacctgttggactttct
acaattgcagctgccattggcgaagatgaagggacaattgaagatatttacgaaccttat
ttgattcaggaaggttttttagtaaaaactgcgcgaggaagagttgcaactcaaaaagcc
ataaatcacatagcaaagataaagtttagggtcaaagagagcggtgataaaagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (38)   
   Pfam (38)   
All databases (48)   

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