KEGG   Caldicellulosiruptor acetigenus I77R1B: Calkr_1270
Entry
Calkr_1270        CDS       T01356                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cki  Caldicellulosiruptor acetigenus I77R1B
Pathway
cki03420  Nucleotide excision repair
cki03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Calkr_1270
   03430 Mismatch repair
    Calkr_1270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cki03400]
    Calkr_1270
Enzymes [BR:cki01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Calkr_1270
DNA repair and recombination proteins [BR:cki03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Calkr_1270
   MMR (mismatch excision repair)
    Other MMR factors
     Calkr_1270
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 AAA_12 PcrA_UvrD_tudor AAA_30 AAA_11 AAA_14 ResIII DEAD CarD_TRCF_RID
Other DBs
NCBI-ProteinID: ADQ40777
UniProt: E4S7N7
Position
1327189..1329333
AA seq 714 aa
MEWLKELNEQQKEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLANPGNILAITFT
NKAADEMKERIKRLVSTQSFSEMWVSTFHAACARILRMEAHNIGFSNNFVIFDTQDRQQL
LKECFDRLNIDPEKLDIRYVSRQISNFKNQLIGPSDVYRYGDVDGRVVEVYKLYNKLLKE
YNAFDFDDLLYYTVVLFETNPDILEKYQNKFKYILVDEYQDTNHAQFYFIYLLSQKHRNV
CVVGDDDQSIYSFRGANIKNILEFEKVFSDAKVIKLEKNYRSTKTILSAANEVIKHNYYR
KSKRLWTDNTEGEKIFLYSAFDEVNEAEFVASSVKNLIESGFSPSEIGVLYRTNAQSVNF
ENALSAYSVPYKVVGALRFYERKEIKDIIAYLRLITNPHDDLSLFRIINVPRRGIGNSTI
EKIKALSEEYNVSAYTVLLERAKFDFDKKTYEKLNSFISLIEDLKAEAEDLSVSSAIKLV
LDKTGYLESLLSSKSEEEFQRAKNIEQLISAAAIFEEENEEPTLQNFLNSITLSSEEEDT
QKEEKVSLMTVHAAKGLEFEVVFLTGLEEGLFPLVRAEEPVEAEKELEEERRLCYVAITR
AKKLLVLTYANNRRVFGRFSSRQKSCFIEEIPQKYIQVVYSPITKTHQTFSVKINQAEDV
SISNLQVGNKVQHGKFGVGKVIWLSDDRREAVVDFENIGQKRLLLSYANLKRIG
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggaatggttaaaagaactaaatgagcagcaaaaagaggcggttctttcaacagaaggg
ccgcttttagtattggctggtgcaggttcagggaaaactcgtgtcataacatatagaata
gcatatatattgaatatggggttagcaaatccgggcaatatccttgcaattacttttaca
aacaaagctgctgatgagatgaaagaaaggataaaaaggcttgttagcactcagtcattt
tcagaaatgtgggtgtctacttttcatgctgcgtgtgcaaggattttgagaatggaagct
cataatataggattttcaaacaactttgtaatatttgatacacaggatagacagcagctt
ttaaaggagtgctttgatcggctgaatatcgacccagaaaagcttgatatcagatatgta
tcaaggcagattagtaatttcaaaaatcaactaatcggaccttctgatgtatacagatac
ggtgatgttgatggtcgtgttgttgaggtgtataaactttacaataaacttttaaaagaa
tacaatgcgtttgactttgatgaccttctgtattacactgtagttctttttgaaacaaac
cctgacattctggaaaagtatcagaataagtttaaatacattttggtagatgagtatcaa
gatacaaaccatgctcagttttattttatttatttactttcacaaaaacacagaaatgtc
tgtgttgtcggtgatgacgaccagagtatatacagtttcagaggagcaaatataaaaaat
attttggaatttgaaaaggtttttagcgatgccaaggtaataaaattagaaaaaaactac
aggtctacaaagacaatactctcagctgcaaatgaggttataaaacacaactattataga
aaatctaaaaggttgtggacagacaacaccgagggtgaaaagatttttctatactcagct
tttgatgaagtgaatgaagcagagtttgttgcatcaagtgtgaaaaatcttattgaaagc
ggattttcaccttcagaaataggagtactctaccgaacaaatgctcagtctgtaaacttt
gagaatgcactttcggcttattctgtgccatacaaagttgtgggtgctttgcgattttat
gaaagaaaagaaataaaagatataattgcttatttgagacttatcacaaatccgcatgac
gatttgagtctatttaggattatcaatgtcccaagaaggggtataggaaacagtacaata
gagaaaataaaggctttgagcgaagaatataatgtttctgcgtataccgtcttactcgag
cgagcaaagtttgattttgacaaaaagacatacgaaaaactaaatagctttatctcgctg
atagaggatttgaaagctgaggcagaggatttgtctgtatcttcagccatcaaacttgtg
cttgacaagacagggtatttagaaagcttgctcagtagcaaaagtgaagaagagtttcag
agagccaagaatattgagcagcttataagcgctgcagctatttttgaagaagaaaatgaa
gagccaaccttgcaaaactttttgaactctattactttgagttctgaagaggaagatact
caaaaagaagaaaaagtttcgcttatgacagttcatgctgcaaaaggattggaatttgaa
gttgtctttctcacagggctggaagaaggactgtttccgcttgttagggcagaagaacct
gttgaagctgaaaaggaacttgaagaagaaagaagactgtgttacgttgcaattaccaga
gcaaaaaagcttcttgttctgacatatgctaacaatcgaagagtatttggcaggttttct
tcacggcaaaagtcatgtttcattgaggagattcctcaaaaatacattcaagttgtttat
agtcctattactaaaactcaccaaacattttctgtcaagattaatcaagctgaagatgtt
tctatcagcaatctacaggttggaaacaaggtccagcacggaaagtttggagttggaaaa
gttatctggctttcagatgataggagagaggcagtagtagattttgaaaatattggccag
aaaagactacttttgtcctatgcaaatcttaagaggattggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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