KEGG   Clostridium kluyveri NBRC 12016: CKR_1363
Entry
CKR_1363          CDS       T00832                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ckr  Clostridium kluyveri NBRC 12016
Pathway
ckr03420  Nucleotide excision repair
ckr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ckr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CKR_1363
   03430 Mismatch repair
    CKR_1363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ckr03400]
    CKR_1363
Enzymes [BR:ckr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CKR_1363
DNA repair and recombination proteins [BR:ckr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CKR_1363
   MMR (mismatch excision repair)
    Other MMR factors
     CKR_1363
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 AAA_11 DEAD ResIII PRK AAA_14 CarD_TRCF_RID NTPase_1 GpA_ATPase PcrA_UvrD_tudor Snf7
Other DBs
NCBI-ProteinID: BAH06414
UniProt: B9E1N9
Position
1511393..1513405
AA seq 670 aa
MINNLDVNQIKAVNTNFKNVVICAPPGSGKTTVIINRINYLITQKNIKPKNIVVITFTRA
SALDMKYRYLSIMNKNPLPFFGTFHSLFYNILKRYKGEINMVESSKAYSLISSVLMRYIG
FVEEEKVKEVLNDISLFRSSSKSMEYFNSKIDKTVFIYCIGEYEKYKSKNNLMDFDDLQL
EVKNILETDKNILKYYSNLFTYILVDEFQDCDRLQIDILKLIGKNSSVFAVGDEDQCIYG
FRGSHPICMVDFNRYFEEGQKLFLKKNYRSVYNVVKMSQNLICNNKNRNLKCVESSRMNR
GNINFKIFESEKEQACYLAHIIKQIIEAGKCRCRDIALLYRTNIECVNIIDSLLKNDIKF
KFLHGKYNFYSHFICKDLICYFKLALDMCDKESFISIVNKPFRYIGKINIEKVRNNRVKE
NCFEILKNIEGIPVFQIKAIDKLQRNIKKLRKIKPKERVKFILDKLEYKDYLHKHCEKLA
SNMEEYYYVIEQFKQICEDFTSIYEFLKHVETAEEFLHKNLQEEDAVILSTLHGVKGMEF
KNVFIINCNEGSIPHSNSILNNLEEERRLFYVGITRAIDNLYLCSTSTIKGRAVEVSRFI
RECNLADLEGVNSLFNLKIGDLVVHKVFGQGKVTEREDKRVSILFSDNIERSFCSSVLYS
GQLSQRGGAL
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgataaataatttagatgtaaatcaaataaaggcagttaatacaaattttaaaaatgta
gtaatttgtgcccctccgggttctggcaaaactacagttattataaataggataaattat
ttaataacccaaaaaaatataaaacctaaaaatatagtggtaataacctttaccagggct
tctgcccttgatatgaaatacagatatctttcaattatgaataagaatccactacctttt
tttggtacttttcattctctattttataatatattgaaaagatataaaggggaaataaac
atggtggaatcttccaaagcctatagtttgattagctctgtacttatgcgttatatagga
tttgtagaagaagaaaaagtaaaagaagtcttaaatgatatatcactttttagaagtagt
agtaaaagcatggaatatttcaacagtaaaattgataaaactgtgtttatatattgtatt
ggagaatacgaaaaatataagtctaaaaataatttaatggattttgacgatttgcagctg
gaggtaaaaaatattttagaaacagataaaaatatacttaaatattatagtaatttattt
acatacatactggtagatgaatttcaagattgtgacagacttcaaatagatattttaaaa
ttaattggtaaaaatagttccgtatttgcagtgggagatgaagaccagtgtatatatggc
tttagaggatctcatcccatatgtatggtggatttcaacaggtattttgaagaaggtcaa
aaattgttcttaaagaaaaattacagaagcgtatataatgtagttaaaatgtctcaaaat
ttaatatgtaataataaaaatagaaatttaaaatgtgttgaaagcagtagaatgaacaga
ggaaatattaattttaaaatttttgaaagtgagaaggaacaggcctgttatttagcccat
attataaaacaaattatagaggcaggaaaatgcagatgcagggatatagcccttttgtac
cgtactaatatagagtgtgtcaatataatagacagcttattaaaaaatgatataaaattt
aaatttttgcatggaaagtataatttttatagtcattttatttgcaaggatttaatatgt
tattttaagctagccctggatatgtgcgataaagaaagttttataagtatagtaaataag
ccttttagatacataggaaaaataaatatagaaaaagtcagaaataatagagtgaaggaa
aattgttttgagattttaaaaaatatagaaggaatacctgtttttcagattaaagccata
gataagcttcaaagaaatataaaaaaattgagaaagataaaacctaaagaaagggtaaaa
tttatattggataaattggaatataaagattatctacataaacattgtgaaaaattagct
tctaatatggaagagtactattatgttatagagcaattcaaacaaatatgtgaagacttc
actagtatttatgaatttttaaaacatgttgaaactgcagaagaatttttgcataaaaat
ttacaggaggaagatgcagttatattaagtactctccacggagtaaaggggatggagttt
aaaaatgtatttataataaactgtaatgaggggtcaattccacactcaaatagtatttta
aataatttggaagaggaaaggcgacttttttatgtaggaattaccagggccatagataat
ttatatttatgctctacaagtaccataaaaggcagggcagtggaagtatccagattcata
agggaatgtaacctggctgatttggaaggggttaattcactgttcaatcttaaaatagga
gatttggtggttcataaagttttcggccagggaaaagtaactgagagagaagataaaagg
gtaagcatattattttcagacaatattgaaagaagcttttgtagttcggtgctttatagt
ggacagttaagtcaaaggggaggtgctttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system