KEGG   Campylobacter lari RM2100: CLA_0470
Entry
CLA_0470          CDS       T00858                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cla  Campylobacter lari RM2100
Pathway
cla03030  DNA replication
cla03430  Mismatch repair
cla03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLA_0470 (dnaX)
   03430 Mismatch repair
    CLA_0470 (dnaX)
   03440 Homologous recombination
    CLA_0470 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cla03032]
    CLA_0470 (dnaX)
   03400 DNA repair and recombination proteins [BR:cla03400]
    CLA_0470 (dnaX)
Enzymes [BR:cla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLA_0470 (dnaX)
DNA replication proteins [BR:cla03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLA_0470 (dnaX)
DNA repair and recombination proteins [BR:cla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLA_0470 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_14 AAA_assoc_2 AAA_5 AAA_24 AAA_30 AAA_19 AAA_16
Other DBs
NCBI-ProteinID: ACM63818
UniProt: B9KFI3
Position
complement(447093..448625)
AA seq 510 aa
MLQALAIKYRPKTFDELVGQSTVSISLKYALENNRLAHAYLFSGLRGSGKTSSARIFSRA
LVCENGPNANPCGKCSQCVSSLNGSNIDIIEMDAASHRSLEDIQELIEQVKYAPSMARFK
IFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLKLPATVLSRTQHFRFKQISQQ
EILKHLEWILEQEKISYEKEALKLIARSGNGSLRDTLTLLDQAIVYCQNHIQTQKITAML
GFLDPAKIEEFYQAILANEKDKVFEFLKEFEDYEASNVIDEMIFFLKEAFFAKNNLFSML
IYERFFRILSRAKTMLNSSDDDSFVLCVMAFMLIEATYLKSIDEAIKGSKQDSTPSPKQQ
EIPSIQQTLKEEKLSPYENLLKAIYKRDYDLAEVFKKTTQFVSFEDDILSISSHAKDDDR
MVLNNGFKLIKTLLHELFGEKTQIKIQKIETIDTQKLQDIFKTPIKQEVKNTPNLNEYFE
NFKKDAKKYDPKDETKEALNKLFGSPTIQS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgcttcaagcacttgcgataaaatacagaccaaaaacttttgatgagcttgtaggtcaa
agcactgtttctataagtttaaaatatgcacttgagaacaatcgcttagcacatgcttat
ttgttttcaggattaagaggaagtggaaaaacatcaagtgctagaattttttcaagagcc
ttagtgtgtgaaaatggaccaaatgctaatccttgcggaaaatgctctcaatgcgtatct
tctttaaatggaagcaatattgacatcatagaaatggatgcggctagccatagaagctta
gaagatatacaagaacttatcgagcaagtcaaatacgctccatctatggctagatttaaa
atttttatcatagatgaagtgcatatgctaacaccacaagctgcaaatgcacttcttaaa
acactagaagaacctccatcttatgttaaattcatacttgcaacaacagatcctttaaaa
ttacctgccacagttctttcaagaactcagcattttagatttaaacaaatttctcaacaa
gaaattttaaaacatcttgaatggatattagagcaagaaaaaatttcttatgaaaaggaa
gctttaaaactcatagcaagaagtggaaatggctccttaagagataccctaaccttgtta
gatcaagctatagtgtattgtcaaaatcatatacaaacacaaaaaatcaccgctatgcta
ggctttttagatcctgctaaaattgaagaattttatcaagctattttagcaaatgaaaaa
gataaagtttttgagtttttaaaagaatttgaagattatgaggctagtaatgttatagat
gaaatgatattttttttaaaagaagcattttttgcaaaaaataatcttttttctatgtta
atttatgaaagattttttagaattctttcgcgtgctaagactatgttaaattctagtgat
gatgatagttttgtgctttgtgttatggctttcatgcttatagaagcaacttatctaaaa
agcatcgatgaggctattaaaggctcaaagcaagatagcacgccaagtccaaaacaacaa
gaaattccttctattcaacaaacccttaaagaagaaaaacttagtccttatgaaaatctc
ttaaaagcaatatataaaagagattatgacttagctgaagttttcaaaaaaaccacgcag
tttgtttcttttgaagatgatattttaagtattagctcacatgctaaagatgatgataga
atggttttaaacaatggttttaaattaatcaaaacattacttcatgaactttttggagaa
aaaacacaaattaaaatccaaaaaatagaaaccatagatactcaaaaactacaagatata
ttcaaaactcccataaaacaagaagtaaaaaacactccaaatttaaatgagtattttgaa
aattttaaaaaagatgctaaaaaatacgatcctaaagacgaaaccaaagaagctcttaac
aagctctttggttccccaactatacaaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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