KEGG   Campylobacter lari RM2100: CLA_0997
Entry
CLA_0997          CDS       T00858                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cla  Campylobacter lari RM2100
Pathway
cla02024  Quorum sensing
cla03060  Protein export
cla03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CLA_0997 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CLA_0997 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CLA_0997 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cla02044]
    CLA_0997 (ffh)
Enzymes [BR:cla01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CLA_0997 (ffh)
Secretion system [BR:cla02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CLA_0997 (ffh)
  Eukaryotic Sec-SRP protein
   CLA_0997 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 6PF2K AAA_19 Zeta_toxin nSTAND3 AAA_30 YqeC AAA AAA_17 Fer4_NifH Anamorsin_N AAA_24 DUF6471 ResIII AAA_33 AAA_14
Other DBs
NCBI-ProteinID: ACM64320
UniProt: B9KCN1
Position
complement(951194..952531)
AA seq 445 aa
MFEIVSESFKSAVNKLRFVDDEKALKNALDTLKKALLKADVHHKVTKELLALVENDVKTN
GIGQKQFLDSIKKNLEEILSVKGKNQGFVFASKPPTVVLMCGLQGGGKTTTTVKIANYLK
LRNKKVLIAACDLQRLAAVEQLRQLTQANELDLFFIENENNPLNVAKQALEKAKNSMYDV
LLVDTAGRLAIDTALMNELKEVKAILNPDEVFYVADAMSGQDGVKTASSFNEALEITGVI
LSKFDADTKGGVALGIAKQIGVPLRFIGVGEKVADLEVFIPDRIVNRIMGEGDLATLAEK
TAAIIDEKEAKKLNKKIKKGEFNFNDFLNQMESVKKLGSMKSIIGMIPGLSSMAANIKDI
DLDNSKEIIHIKAMISSMTPKERENPDLLNNARKRRIAEGAGLSQMEVNRFLKQFSNAAK
LAKKFSNKKGMDNFMNMLQQAKRPQ
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtgtttgaaatagttagcgaatcatttaaatccgcagttaataaacttcgttttgttgat
gatgaaaaagctttaaaaaatgctcttgacactttaaaaaaagcccttttaaaagcagat
gtgcatcataaagttactaaagaattattagctcttgtagaaaatgatgtaaaaactaat
ggcataggtcaaaaacaatttttagactcaattaagaaaaatttagaagaaattttaagt
gttaaaggcaaaaatcaaggttttgtgtttgccagtaagccacctacggttgttttaatg
tgtggtttgcaaggtggtggtaaaactactactacagtaaaaattgctaattatttaaaa
ctaagaaataaaaaagtactaattgctgcatgtgatttgcaaagattagctgcagtagag
caattaagacaactcactcaagctaatgagcttgatttatttttcatcgaaaatgaaaat
aaccctttaaatgtagctaaacaagctttagaaaaagcaaaaaattctatgtatgatgtt
ttacttgtagatactgctggccgtttagctatagatactgctttaatgaatgagcttaaa
gaggtaaaagctattttaaatcctgatgaagttttttatgtagctgatgctatgagtggt
caagatggcgttaaaactgcaagtagttttaatgaggctttagaaattactggggttatt
ttaagtaaatttgatgcagatactaaaggcggggttgcactaggtatagctaagcaaatt
ggtgttccattaagatttataggtgttggtgaaaaggtagctgatttagaagtttttata
cctgataggattgtcaatcgtattatgggcgagggcgatttagcgactttggctgaaaaa
actgcagcgattattgatgaaaaagaagcaaaaaaacttaataagaaaattaaaaaaggc
gaatttaattttaatgactttttaaatcaaatggaaagtgttaaaaaacttggtagtatg
aaatcaatcattggcatgatacctggtttatcatctatggcagcaaatattaaagatatt
gacttggataattctaaagaaattattcatattaaggcaatgatttcttcaatgactcca
aaagaaagagaaaatcctgatttattaaacaacgcaagaaagcgtcgtattgcagagggt
gctggtttatcacaaatggaagtaaatcgctttttaaaacaatttagtaatgcagctaag
ttggcaaagaaattttcaaacaaaaaaggaatggataactttatgaatatgttgcagcaa
gctaaaagaccacaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

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