KEGG   Cedecea lapagei: NCTC11466_03460
Entry
NCTC11466_03460   CDS       T05810                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
clap  Cedecea lapagei
Pathway
clap00740  Riboflavin metabolism
clap01100  Metabolic pathways
clap01110  Biosynthesis of secondary metabolites
clap01240  Biosynthesis of cofactors
clap02024  Quorum sensing
Module
clap_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:clap00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NCTC11466_03460 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCTC11466_03460 (ribD)
Enzymes [BR:clap01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NCTC11466_03460 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NCTC11466_03460 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Acyltransferase
Other DBs
NCBI-ProteinID: VEB99896
UniProt: A0A3S4J4H1
Position
1:complement(3477842..3478960)
AA seq 372 aa
MSLDEQFMARALELAKRGRFTTAPNPNVGCVIVKDGKIVGEGFHFRAGEPHAEVHALRMA
GEQARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAG
IEVSHGLMMNEAEALNRGFLKRMRTGFPYIQLKLGASLDGRTAMASGESKWITSPQARRD
VQRQRAQSAAILSSSATVLADNPSLTVRWDELDGASQAIYAQQDLRQPIRIVVDRQNRVT
PQHQIIANPGQTWLARSHADDQIWPEGVEQLLVPEHNGHLDLVVLMMQLGKRQVNSVWVE
AGATLAGALLQAGLVDELIVYVAPKLLGNDARGLCELPGLEKLADVPEFSFSEVRQVGPD
LCLHLTPVYGRQ
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcccttgatgaacagtttatggctcgtgcgcttgagctggcaaagcgcgggcgtttc
accacggcgccgaaccccaatgtcggctgcgtgattgtcaaagacggcaaaattgtggga
gaaggattccattttcgtgccggtgaacctcatgcagaagtacacgctttgcgtatggcg
ggtgagcaggcccggggcgcaacggcctatgtgacgctcgagccctgcagccaccatggg
cgtaccccgccgtgctgcgacgccttaattgccgcaggcgtatctcgtgttgtcgccgcc
atgcaggatcccaatccgcaggttgccgggcgtggtctctatcgcctgcagcaggcgggc
atcgaagtcagccacggcttaatgatgaacgaggccgaagcgctgaaccgcggtttcctc
aaacgtatgcgcaccggttttccgtatatccagcttaaactcggcgcctcgctggatggg
cgtaccgcgatggcgagcggagagagcaaatggattacctctcctcaggcgcgtcgtgac
gttcagcgtcaacgcgcacaaagtgccgctatcctctcaagcagcgcaaccgtgctggcg
gataacccgtcattaacggtacgctgggatgaactggatggcgccagccaggccatctat
gctcaacaggatttacgccagccgattcgcattgtggttgatcgtcaaaaccgcgtgacg
ccgcagcatcagattatcgccaacccgggtcagacctggcttgcccgcagccatgccgat
gatcaaatctggcctgaaggcgttgagcaactgctggtgcctgaacataacggccatctt
gatttggtggtgctgatgatgcagctgggcaaacgccaggtgaactctgtctgggttgag
gcgggggcaacgcttgctggtgcgctgctgcaggcgggcctggtggatgagcttattgtc
tacgtcgcgccaaaattattaggcaatgatgcccgcggtttgtgcgagcttccaggcctt
gaaaaacttgctgatgtgccggagttcagctttagcgaagtccgccaggtcggtcccgat
ttgtgtctgcacctgacgcccgtttatggacgccagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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