KEGG   Cedecea lapagei: NCTC11466_04285
Entry
NCTC11466_04285   CDS       T05810                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
clap  Cedecea lapagei
Pathway
clap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC11466_04285 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clap03400]
    NCTC11466_04285 (uvrA)
DNA repair and recombination proteins [BR:clap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC11466_04285 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NCTC11466_04285 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 NACHT Viral_helicase1 cobW AAA_21 ExoX-like_C
Other DBs
NCBI-ProteinID: VEC01541
UniProt: A0A447V7S7
Position
1:4297410..4300235
AA seq 941 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDIPLAAQTVSQMVDNVLAQPEGKRLMLLAPIIKDRKGEHAKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDIAQRLAESFETALELSGGSAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNGEL
SLAGGAIRGWDRRNFYYFTMLRSLAEHYKFDVESPWNELSDTVKKVVLHGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCTSCEGTRLRREARH
VFVENTALPTISDMSIGHAMEFFQNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVVAEGTMKDIIAVPESLTGQFLSGKREIAV
PKQRVAADPSKVLKLSGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIVEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
ARSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLDMTIEDAREFFDAVPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVATCEASHTARFLKPLLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccacaatctcaaaaatatcaacctcgtc
atcccgcgcgacaaactgattgttgtcaccgggctttcgggttcaggcaaatcctcgctg
gcattcgacaccctgtacgcagaagggcagcgccgctacgttgaatccctctccgcctac
gcgcgtcagttcctgtcgctgatggaaaagccggatgtcgaccatatagaagggctgtcg
ccggcgatttctatcgaacagaaatccacgtcgcataacccgcgctccaccgtcggcacc
attacggaaatccatgactacctgcgtctgctttacgcccgcgtcggcgagccgcgctgc
ccggatcacgatatcccgctcgcggcacaaaccgtcagccagatggtcgataacgtgctg
gctcagccggaaggcaaacgtctgatgctgcttgcgccgatcattaaagatcgtaaaggc
gagcacgctaaaacgctggaaaatctggcaagccagggctacatacgcgcgcgcatcgac
ggtgaagtctgcgatctgtccgatccgccgaaattagagctgcagaagaagcacactatt
gaagtggttgtggaccgtttcaaggtgcgcgaagacatcgcccagcgcctggccgagtcg
tttgaaaccgcgctggagctctccggcggctctgcggttgtcgccgacatggacgatgaa
aaagcggaagagctgctgttctccgccaactttgcctgtccgatttgcggctacagcatg
cgcgagctggaaccgcgcctgttctcctttaataacccggccggcgcctgcccaacctgc
gacggactgggcgttcagcaatatttcgatccggaccgcgtggtgcaaaacggcgagctg
tcgctggccggcggagctattcgcggctgggatcgccgtaacttctactacttcaccatg
ctgcgctcgctggccgagcactataagttcgacgtggaatccccgtggaacgagctgagc
gacacggtgaagaaggtcgtgctgcacggatctggcaaagaatccatagaattcaaatat
atgaatgaccgcggcgatacctccgtgcgccgccatccgttcgaaggcgtgctgcacaac
atggagcgccgctacaaagagacggaatcttccgccgtgcgggaagagctggcgaagttc
atcagcaaccgcccctgcaccagctgcgaaggcacccgtctgcgccgtgaagcgcgccat
gtgtttgtcgaaaacaccgcgctgccgaccatctctgacatgagcatcggccatgcgatg
gaattcttccagaacatgaagctgagcggccagcgcgcgcaaatcgcggaaaaagtgttg
aaagagattggcgaccgcctgaagttcctggtgaacgtcggcctgaactacctctctctc
tcccgttcagcagaaacgctgtccgggggcgaagcccagcgtatccgtctggctagccag
attggcgccgggctggttggcgtaatgtacgtgctggatgagccgtcaatcggcctgcac
cagcgcgataacgaacgcctgctggaaaccctgattcacctgcgtaacctcggcaacacg
gtaattgtggttgagcacgatgaagatgccattcgcgccgccgaccatattatcgatatt
ggcccaggcgcgggcgtgcacggcggccaggtagtcgccgaaggcaccatgaaggatatt
atcgcggtgccggagtccctgaccgggcagttcctgagcggcaaacgcgaaattgcggta
ccgaaacagcgcgttgccgccgacccatcgaaggtgctcaagctctccggcgcgaagggc
aacaacctgaaggacgttacgcttacgctgccggttgggctgtttacctgtatcaccggg
gtttcaggctcagggaaatcgacgctgatcaacgatacgctgttcccgattgcccagcgc
cagttgaacggcgccacgattgtcgagcccgcgccgtatcgcgatgttcagggtctggag
catttcgataaggtcatcgacatcgaccaaagcccgattggccgtacgccgcgctccaac
ccggcaacctacaccggcgtcttcacgcccgttcgtgagctgtttgccggcgtgccggaa
gcgcgctcacgcggctatacgccggggcgtttcagcttcaacgttcgcggcgggcgctgt
gaagcctgccagggcgacggcgtaatcaaggtggaaatgcacttcctgccggatatctac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgtgaaacgctggagattaagtac
aaagggaaaagcattcacgaagtgctggatatgaccattgaagacgctcgtgagttcttc
gatgccgtaccggcgctggcgcgtaagctgcaaacgctgatcgacgtaggcctgtcctat
attcgtctcggccagtcggccaccacgctgtcgggcggcgaagcgcagcgcgttaagctg
gcgcgtgagctctccaaacgcggtaccggccagacgctgtatatccttgatgagccgacc
accggcctgcacttcgcggatattcagcaacttctggaagtgctgcatcagctcagggat
cagggcaacaccatcgtggtcattgaacacaacctcgacgtgattaaaaccgcagactgg
attgtggatctggggccggaaggcggcagcggcggcggtgagattctggtctccggcacg
ccggaaaccgtcgcgacctgcgaagcatcccataccgcacggttccttaaaccgttgctg
aaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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