KEGG   Clostridium sp. BNL1100: Clo1100_0569
Entry
Clo1100_0569      CDS       T01708                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
clb  Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:clb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clb03021]
    Clo1100_0569
Transcription machinery [BR:clb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Clo1100_0569
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE HTH_23 HTH_30 Sigma70_ECF DUF1492
Other DBs
NCBI-ProteinID: AEY64846
UniProt: H2JJC4
Position
623026..623592
AA seq 188 aa
MRAVELEKVRNAIRGNKNAFAELIDERKKDIYRIAYIYVKNNSDTMDLFHETVYNAFATI
KKLKNPEFFNSWITRITINCCINFLKKRKRITENEVQCLDSDDIYQYSDGTPDLSEVLSS
NIDLIGAVEKLDIKLKTVILLKYYQDFTINQIAEILECPTGTVKTRLNRALNLLRLELED
VKGGNFNE
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagggctgttgaattagaaaaagtaagaaatgctattagaggtaataaaaatgcgttt
gccgaattaatagacgaaagaaaaaaagacatatacaggatagcttatatttatgtgaag
aataattcagatacaatggatttgttccacgaaacagtatacaatgcctttgcaacaata
aaaaaacttaaaaatcctgaattttttaattcatggattacaaggataacaataaattgt
tgtattaattttctgaagaaaagaaagagaatcactgaaaatgaggtacaatgtctggat
tcagatgatatataccaatattcagatggtacacctgatttgtcggaagttctttcttca
aatattgacctgataggagcagtagaaaaattagatattaagttgaaaacagtaatactt
ctaaagtattatcaagattttactattaatcaaatagctgaaattttagaatgtcccaca
ggtactgttaaaaccagacttaatagagcgttaaaccttttgagacttgagctagaggat
gttaaaggaggtaattttaatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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