KEGG   Clostridium sporogenes: CLSPO_c35430
Entry
CLSPO_c35430      CDS       T03905                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
cld  Clostridium sporogenes
Pathway
cld03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cld00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLSPO_c35430 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cld03400]
    CLSPO_c35430 (uvrB)
DNA repair and recombination proteins [BR:cld03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLSPO_c35430 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CLSPO_c35430 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 BrxC_BrxD SWI2_SNF2 4HB_MCP_1 Lipase_GDSL
Other DBs
NCBI-ProteinID: AKC64233
UniProt: A0A7X5SY87
Position
complement(3874051..3876039)
AA seq 662 aa
MSQFKVISKFNPTGDQPKAIKSIAKGIENGEKFQTLIGVTGSGKTFTMANIIEKVQKPTL
VLAHNKTLAAQLCSEFRDFFPNSAVEYFVSYYDYYQPEAYVAQSDTYIEKDASINDEIDK
LRHSATAALFERRDVIIVASVSCIYGLGNPEEYKKLTISLREGMEKDRDEIIKKLVEIQY
ERNDIDFSRGTFRVKGDVLDIFPAASSNKAIRVEFFGDEIDRIKEFDSLTGETITKLKHV
SIFPASHFATSKDRLEIAIKSIEEELEERVKELVSQDKILEAQRLKQRTNFDIEMMREVG
YCTGIENYSRVLDGRAKGTSPQTLLDYFPDDFLLFIDESHVTLPQVKAMQAGDKSRKDSL
VEYGFRLPCAYDNRPLTFNEFENKLNQVVFVSATPAKYELEHSTNTAEQVIRPTGLLDPE
IIVKPVKGQIDDLYANIQETIKRGFRILVTTLTKKMAEDLTDYLKEMGIKTRYLHSDIDT
IERMKIIHDLRKGEFHVLVGINLLREGLDIPEVALVTILDADKEGFLRSETSLIQTVGRA
ARNSESKVIMYGDVITKSMERTIKETNRRRKIQMEYNEKHGIVPKTIIKDIREVIQISDI
AEEREEYDNLNEALKSYNNDIDKLIEQYEKEMREAAQNLQFEKAAHLRDVIYKLKKDKET
EF
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgagccagtttaaggtaatttcaaaatttaatcctacaggagatcagcctaaagctata
aaatctattgctaaaggtatagaaaatggggaaaaatttcaaacgttaataggtgtaaca
ggatcaggtaaaacttttactatggcaaatattatagaaaaagttcaaaaacctacttta
gttttagctcataataaaacactagcagcacaattatgctcagagtttagagattttttc
cctaatagtgcagtggaatatttcgtatcttattatgactattatcaaccagaagcatat
gtagctcaaagtgatacatacatagaaaaggatgcatctataaatgatgaaatagataaa
ttgagacattcagctacagcagctttatttgagagaagagatgtaataattgtagcttct
gtgtcctgtatatatggacttggtaatccagaagagtataaaaaattaaccatatcttta
agagaaggaatggaaaaagatagagatgaaattattaaaaaattagtagagatacaatat
gaaagaaatgatattgatttttctagaggtacctttagagttaagggtgatgtgttagat
attttccctgctgcatctagcaataaggcaataagggttgaattttttggggatgaaata
gatagaataaaggaatttgattcattaacaggagaaaccataactaaattgaaacatgta
tcaatattcccagcttcccactttgcaacttcaaaggataggttagaaattgctataaaa
agtatagaagaagaactagaagaaagagtgaaagagctagtatcacaagataaaatatta
gaagctcaaaggttgaaacaaagaactaattttgatatagaaatgatgagagaagttgga
tattgtacaggcatagaaaattattcgagagtattagatggaagagctaaaggaacatca
cctcagacattattagattattttcctgatgattttcttctttttatagatgaaagccat
gtaactttgccacaggtaaaagctatgcaggcaggagataaatctagaaaggattctttg
gtggaatatggatttaggttgccttgtgcttatgataataggcctcttacttttaatgag
tttgaaaataaattaaatcaagtagtttttgtaagtgctacaccagcaaaatatgaatta
gaacattctactaatacagcagaacaagttataaggcctacaggacttctagatcccgaa
ataattgttaaaccagtgaagggtcagatagatgatttatatgctaacatacaggaaaca
attaaaagaggatttagaattttagtaactacattaacaaaaaaaatggcagaagacttg
acagattatttaaaagagatgggaataaaaactagatacttacattcagatatagatact
atagaaagaatgaagataatacatgatcttagaaaaggagaatttcatgttttagtagga
ataaacttactaagagaaggattggatataccagaagtagctttagttacaatattagat
gcagataaagagggatttttaagatcagaaacctctcttatacagaccgttggaagggca
gcaagaaactctgaaagtaaggtaattatgtatggagatgttataactaaatccatggaa
aggactataaaagaaactaacagaagaagaaaaatacaaatggaatataatgaaaaacat
gggattgttcctaaaactataataaaagatataagagaagtaattcaaataagcgatata
gcagaggaaagagaagaatatgacaatttaaatgaagcattaaaatcttataataatgat
atagataaattaatagaacaatacgaaaaagaaatgagagaggcagcacaaaatttacag
tttgaaaaagcagctcatttgagagatgtaatatacaaattaaaaaaagataaagaaaca
gaattttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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