KEGG   Cellulosilyticum lentocellum: Clole_1346
Entry
Clole_1346        CDS       T01448                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cle  Cellulosilyticum lentocellum
Pathway
cle03410  Base excision repair
cle03430  Mismatch repair
cle03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Clole_1346
   03430 Mismatch repair
    Clole_1346
   03440 Homologous recombination
    Clole_1346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cle03400]
    Clole_1346
DNA repair and recombination proteins [BR:cle03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Clole_1346
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Clole_1346
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Clole_1346
SSDB
Motif
Pfam: DHH DHHA1 Toprim RecJ_OB Chalcone_N
Other DBs
NCBI-ProteinID: ADZ83072
UniProt: F2JI44
Position
complement(1536473..1538146)
AA seq 557 aa
MQTILEHKQQSYTKEEQCVIDEVSSTYKLYDFVAAIICMRNAFNLDEIKEYILGTTRPKS
YKGLKDIEKAISLITESISLNEKIRIVGDYDVDGVTSTYVLLTVFEALNYPHISHYLPVR
EKDGYGLNPDIVANAHADGVSLLITVDNGISAVEAVASAKELGMKVIVTDHHELPNELPI
ADAIINPHQVDCDYPYKSLAGVGIAYKLGQALISHFKLKPAPALVARIQGLVALGTVCDV
APLVGENRHMVKTGLGALNKGALPAATMINSRISVGTLGFQIGPRLNACGRLESAETALE
YLRTTDPNTLYPFKQRLDSLNKERQDEEMDSIARVNAKVEAMTTLPDIIIDIDEMAHESV
VGLVAGRIKEKYYRPTVVFSRTIHGTYKGSGRSIEEYDMFQSFKPFLHLLDGGGGHPMAC
GLKASTVEQIHAFAKAVNEASSLTEHDKTPKIYVDKCIYNAYEYDFNELEKQLRLFLPTG
AGNSAPTLLIKDASLKFNTKYAKNHRISEVVANFGPKSIASTLWNDDTLPEAGDYTGDIT
LQVSETGWQIKSIYLAI
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgcaaactattttagaacataaacagcaaagctatacaaaggaagagcagtgcgttatt
gatgaggtatcttcaacttacaaactttatgattttgttgctgctatcatttgcatgcgc
aatgcttttaacttagatgaaataaaagaatatattttaggtactacgagacctaaaagc
tataaaggcctaaaagatattgaaaaagctataagccttattactgaaagtatatcactt
aacgaaaaaattcgtattgtaggggattatgatgtagatggtgtaacgagtacttacgtt
cttctcactgtcttcgaagccttaaattatcctcatattagtcattacttgccggttcgc
gagaaggacggctatgggttaaacccagatattgtagctaatgctcatgcggatggtgta
agcttactgattactgtagataatggtatttctgcggtagaagctgtggctagtgctaag
gaacttggaatgaaagtcattgttactgaccaccatgagctgcctaatgagcttccaata
gcagatgctatcattaatccacatcaagtagattgtgattatccttataaaagtctggca
ggtgtaggtattgcttataaattaggtcaagccttaatctctcactttaaattaaaacct
gctccagctttagtagcacgtattcagggattagttgcactaggtactgtctgtgatgta
gcacctttagttggagaaaatcgtcatatggtaaaaacaggtttgggtgcacttaataaa
ggtgccttacctgccgctaccatgattaattctcgtatttctgtgggaactttaggtttt
caaattggtcctagattaaatgcttgtggtcgacttgaaagtgccgaaaccgctcttgaa
tacttacgtaccactgatcctaataccctttatccttttaaacaacgcttagacagctta
aataaagagcgccaagatgaggaaatggactctattgcaagagtcaatgcaaaggttgaa
gccatgactaccttacccgatattattattgacattgatgaaatggctcatgaaagtgtg
gttggcttagtagctgggcgtattaaagaaaagtactatcgtccgactgttgttttttca
cgcactattcatggtacttataaaggttctggacgctctatcgaagaatatgatatgttc
caaagcttcaagccttttcttcatttattagatggtggtggtggtcaccctatggcttgt
ggtcttaaagcttccactgtagaacaaattcacgcgtttgccaaagctgttaacgaggct
tcctctttaacagaacatgataaaacaccaaagatttacgtggataaatgtatttataac
gcttatgagtacgactttaatgaactagaaaaacaactaaggcttttcttacctacaggt
gctggtaatagtgctcctactttactcattaaagatgcctctcttaaatttaatacaaaa
tacgctaaaaatcatcgtatttctgaagtcgttgctaactttggtcctaaatctattgca
agtaccctttggaatgatgatacccttcctgaagctggcgactataccggtgacattacc
ttgcaagtaagtgaaacaggctggcaaattaaaagtatttatcttgctatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system