KEGG   Caldisphaera lagunensis: Calag_1217
Entry
Calag_1217        CDS       T02380                                 
Name
(GenBank) DNA topoisomerase I, archaeal
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
clg  Caldisphaera lagunensis
Brite
KEGG Orthology (KO) [BR:clg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clg03032]
    Calag_1217
   03400 DNA repair and recombination proteins [BR:clg03400]
    Calag_1217
Enzymes [BR:clg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Calag_1217
DNA replication proteins [BR:clg03032]
 Prokaryotic type
  DNA Topoisomerases
   Calag_1217
DNA repair and recombination proteins [BR:clg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Calag_1217
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-ProteinID: AFZ70936
UniProt: L0AAM6
Position
1212377..1214446
AA seq 689 aa
MSKNTSRNCYSYKDFIALIAEKPKAAEKIALALGSYGKLEKCRYYKVPYYVIRSDGRTIL
ILPSAGHLFGPSTTGRGVPIVKIVWKPLWEFDKAAYYTKTYYMMMSSILPNAGSYINACD
FDIEGSVIGYKIIESFGDVKKAKRMKYSTLTKNDIIDAFNKLSPLDLENVNAGYARHELD
WLWGINVSRLLMKSFKNETNKSISLSAGRVQSPTLAEAIRRWIEINLYLPKPFLSILILG
EYDGKRFLITPKNWSPKTISEAKEIKKFLEKNPVLNVDDYQESKEKVPPPPAFNLGDLQK
ESSRIYGFSPFKTQSIAEELYLETLISYPRTNSQKLPKTINYKQIINDLSKQSYKNLIDT
LLKETQGKLNPVQGREDDPAHPAIYPTGEVPKKIYGDYLKIYDLIVRRFLSAFSKEAILG
KSYVTLSDNENRKYKAEGLVVMEEGWLKYYTFSYPKINEIPVLRKNDKVKIIKVDLKTIW
PKINVSLSRTSLLRWMERVNIGTEATRARIIELLYKRKYLINKGRNTEITNLGYAVYKAI
ELVSKELISPELTRNFEEKLDLISKGKYTKDEIVNEAKEFLTKIIKEKLNDKSIGKSLAI
ALGIEKPEEMCYICKREAKHKVLNYSLCDFHFMALSKIKENIADLVNILEDNDVNILKEL
SENKSIGLWIRETSKFLINNDIKIQNLKV
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgagcaaaaatactagcagaaattgttattcctataaagattttatagcattaatagca
gaaaagccaaaagcagctgaaaagatagcattagcgctaggaagctatggaaaattagag
aagtgtagatattataaagttccatattatgtaattagaagtgatggtaggactatttta
attctaccaagtgctggccatttatttggcccctcaacaacaggaagaggagttcctata
gtaaaaatagtatggaaaccattatgggaatttgacaaagctgcatattatactaaaaca
tactatatgatgatgtcatctattttaccaaatgctggttcctatataaatgcttgcgac
tttgatattgaaggaagtgttataggctataaaataatagaaagctttggagatgtgaaa
aaagcaaagagaatgaaatactcaaccttaacaaaaaatgacattattgatgcatttaat
aaattatcaccattggatttagagaatgttaacgctggttatgcaaggcatgagttagat
tggttatggggtataaatgtatcaagacttcttatgaaatcatttaaaaatgaaacaaac
aaaagtatctcattaagcgcaggaagagttcaaagccctactcttgctgaggcaataaga
agatggatagaaataaacctctatttaccaaaaccttttttatcaatattaatattaggg
gaatatgatggcaaaaggtttctaataacacctaaaaattggtctccaaaaacaatttct
gaagcaaaagaaataaagaaattcctagaaaagaacccagttttaaatgttgacgactac
caagaaagtaaagagaaagttcctcctcccccagcatttaatttaggagatctccaaaaa
gagtcctcaagaatttatggattttccccatttaaaacccaaagtattgcagaagagctt
tatttagaaacattaattagttatcctagaacaaatagccaaaaactgcctaaaacaata
aattataagcaaataatcaatgacctatctaaacaaagctataaaaatttaattgatacg
ttattaaaagaaacacaaggcaaactaaatcctgttcagggaagagaagatgatccagca
catcctgcaatatatccaacaggtgaagttcctaaaaaaatatacggagattatttaaaa
atatatgatcttatagtcagaaggtttttgtcagcattttcaaaagaagctattctagga
aaaagctatgttacgttaagcgataatgagaatagaaagtataaggctgaaggtttagtt
gtaatggaagaaggatggttaaaatattacacattttcatatccaaaaatcaacgaaata
ccagttttaaggaaaaatgataaggtaaaaataataaaagttgatttgaaaaccatatgg
cccaaaataaatgtatcccttagtagaacttcattattaagatggatggaaagagttaat
attggaacagaagcaactagagctagaattattgaactattatataaaagaaagtattta
ataaacaaaggaagaaatacagaaataactaatttaggatatgcagtttataaggccatt
gagcttgtctctaaggagttaatttctcctgaattaacaagaaattttgaagaaaagctg
gatctaatatcaaaaggaaaatatacaaaggatgagatagtgaatgaagcaaaggaattt
ctaactaaaataataaaagaaaaattaaatgataaaagcattggaaaaagtttagcaatt
gctttaggtatagaaaagccggaagaaatgtgttatatctgtaaaagggaggccaaacac
aaagttttaaactacagtttatgtgattttcattttatggcattaagtaaaataaaagag
aatatagcggatttggttaacatattagaagataatgatgtaaatatattaaaagaactt
tcagaaaataaatctataggcttatggattagagagacaagtaagtttttaattaataat
gatattaaaatacaaaatttaaaagtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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