KEGG   Cellulophaga lytica HI1: IX49_10230
Entry
IX49_10230        CDS       T03279                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
clh  Cellulophaga lytica HI1
Pathway
clh03030  DNA replication
clh03430  Mismatch repair
clh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:clh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IX49_10230
   03430 Mismatch repair
    IX49_10230
   03440 Homologous recombination
    IX49_10230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clh03032]
    IX49_10230
   03400 DNA repair and recombination proteins [BR:clh03400]
    IX49_10230
Enzymes [BR:clh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IX49_10230
DNA replication proteins [BR:clh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IX49_10230
DNA repair and recombination proteins [BR:clh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IX49_10230
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DEDDh_C DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIM60881
Position
complement(2277008..2277673)
AA seq 221 aa
MINFFKKSKLDLPDYWLEYENLFKTKQPENIQDITFVVLDTETTGFSYQEDRMLCIGALK
LKNNDINIGDSFEVFIHQDHYNQETAEIHGILKEGKTTRLEELETLKLFLAYLKNSVIVA
HHAGFDVTFINMALERHGLPKLKNKILDTSTLYKKTLIRSNLLVKKEHYSLDELAEKFSI
SVKDRHTALGDAYITAIAFLKILVKLKEKKITTLKQLLRIY
NT seq 666 nt   +upstreamnt  +downstreamnt
atgataaatttctttaaaaaaagtaaattagatttaccagattattggcttgaatatgaa
aatctttttaaaaccaaacaaccagaaaacatacaagatattacgtttgttgttttagat
acagaaactactggctttagttaccaagaagatcgtatgctttgtattggtgctttaaaa
cttaaaaataatgatattaatataggtgatagttttgaggtttttatacaccaagatcat
tacaaccaagaaacggcagaaatacacggaatattaaaagaaggtaaaactactagactt
gaagagctagaaaccttaaaactgtttttagcgtacctaaaaaacagtgtcattgtagcc
caccacgctggttttgatgttacttttataaatatggcattagagcgccatggcttaccc
aaattaaaaaacaaaattttagatacatctaccttgtataaaaaaacacttatacgctct
aatttattggtaaaaaaagagcattattctttagatgaattggcagaaaagtttagtata
tctgtaaaagataggcataccgctcttggtgatgcgtatattactgctattgctttttta
aagattttggtaaaattaaaagagaaaaaaattaccactttaaaacagttactccgaatt
tattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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