KEGG   Chlorobium limicola: Clim_0498
Entry
Clim_0498         CDS       T00766                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cli  Chlorobium limicola
Pathway
cli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Clim_0498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cli03019]
    Clim_0498
   03110 Chaperones and folding catalysts [BR:cli03110]
    Clim_0498
   03029 Mitochondrial biogenesis [BR:cli03029]
    Clim_0498
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cli04147]
    Clim_0498
Enzymes [BR:cli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Clim_0498
Messenger RNA biogenesis [BR:cli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Clim_0498
Chaperones and folding catalysts [BR:cli03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Clim_0498
Mitochondrial biogenesis [BR:cli03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Clim_0498
Exosome [BR:cli04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Clim_0498
  Exosomal proteins of other body fluids (saliva and urine)
   Clim_0498
  Exosomal proteins of breast cancer cells
   Clim_0498
  Exosomal proteins of colorectal cancer cells
   Clim_0498
  Exosomal proteins of bladder cancer cells
   Clim_0498
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ACD89591
UniProt: B3EGF4
Position
564527..566170
AA seq 547 aa
MTAKDIIFDSDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEI
ELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGI
DRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEA
KGMDTELKVVEGMQFDRGYLSPYFVTNPETMEAEIEDPLILIHDKKIGNMKELLPILEKS
AQSGRPLLIIAEDIEGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEKGYKLENATLAYLGQAGRVNIDKDNTTIVEGKGTQEDIKARINEIKGQIDKSTSDY
DTEKLQERLAKLSGGVAVLNIGASTEVEMKEKKARVEDALHATRAAVQEGIVVGGGVALI
RAIKGLANAVADNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKAAEGDFGFN
ARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDIKEEKSDMPAMPPGGM
GGMGGMY
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgactgctaaagatattatttttgattccgacgccagagcaaagctcaaagtcggtgtg
gacaaactggctaatgccgtgaaagttaccctcggacctgccggacgaaatgtgcttatc
gataaaaagttcggagctccgacctcgaccaaagatggcgtgaccgtagcaaaagagatc
gaacttgccgacgccgtcgagaacatgggcgcacagatggttcgcgaagtcgcttcgaaa
accagtgatgtcgccggtgacggtactactaccgcgacggtgcttgctcaggcaatctac
cgtgaggggctgaagaacgttgccgcaggtgcacgtccgatcgatcttaaaagaggtatc
gaccgtgccgtgaaagaggttgtcgcagaactgcgcaacatcagccgcagcatctccggc
aaaaaggagatcgcacaggtcggcaccatttcagccaacaacgatcctgaaatcggcgaa
ctgatcgcagaggccatggacaaggtcggcaaggacggcgttatcaccgtcgaagaggca
aagggcatggataccgagttgaaggttgtcgagggcatgcagttcgatcgcggctacctc
tctccgtatttcgtgaccaatcccgaaaccatggaagccgaaatcgaagacccgctgatc
ctcattcacgacaagaagatcggcaacatgaaagaactgcttccgatcctcgaaaaatca
gcccagtcaggtcgtcctttgctcatcattgcagaggatatcgaaggcgaagcgctggca
acccttgtggtcaacaagctcagaggtactctgaaagtctgtgccgtgaaggctccggga
ttcggcgaccgtcgcaaggcaatgctcgaggatatcgccattcttaccggcggtaccgtg
atttccgaagagaagggctataaactcgaaaatgcaacgcttgcctacctcggtcaggca
ggtcgtgtcaacatcgataaggataacaccactattgtcgaaggcaaaggcacacaggag
gacatcaaggcccgcatcaacgaaatcaaaggccagatcgacaaatcgacttccgactac
gataccgaaaagctgcaggagcgtcttgcaaagctttccggcggtgtcgctgtgctgaac
atcggcgcatcaaccgaagttgaaatgaaggaaaagaaagcccgcgtcgaagatgcactg
catgccacccgcgctgcagtccaggaaggcatcgtggtcggcggcggtgttgctctgatc
cgtgcgatcaaaggtctcgccaatgcggttgcagacaatgaagaccagaaaaccggtatc
gagatcatccgccgcgcgctcgaagagccgctccgtcagattgttgccaataccggcacc
accgacggcgctgtcgtgcttgagaaagtcaaggcagctgaaggcgacttcggcttcaac
gcacgtaccgagcagtacgagaaccttgttgaggcaggtgttgtcgatccgaccaaagta
accagaagcgctcttgaaaatgccgcttcggttgccagcatccttcttaccaccgaagca
gccattaccgacatcaaggaagagaaatctgacatgccggcaatgcctccgggcggcatg
ggcggcatgggcggcatgtactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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