KEGG T01276: CLJU

Clostridium ljungdahlii: CLJU_c00070

Entry

CLJU_c00070       CDS       T01276

Symbol

gyrA1

Name

(GenBank) DNA gyrase, subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

clj Clostridium ljungdahlii

Brite

KEGG Orthology (KO) [BR:clj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clj03032]
    CLJU_c00070 (gyrA1)
   03400 DNA repair and recombination proteins [BR:clj03400]
    CLJU_c00070 (gyrA1)
Enzymes [BR:clj01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CLJU_c00070 (gyrA1)
DNA replication proteins [BR:clj03032]
Prokaryotic type
  DNA Topoisomerases
   CLJU_c00070 (gyrA1)
DNA repair and recombination proteins [BR:clj03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CLJU_c00070 (gyrA1)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2 tRNA_NucTran2_2

Other DBs

NCBI-ProteinID:

ADK13121

UniProt:

D8GK03

Position

6448..8919

AA seq 823 aa
MFDEGKILPVDISREMKKSYIDYAMSVIVSRALPDVRDGLKPVHRRILYSMYELGLTPEK
GYRKCARIVGDVLGKYHPHGDTAVYDALVRLAQDFSIRYTLVDGHGNFGSVDGDSAAAMR
YTEAKMNKITLEMLRGINKNTVDFVPNFDGEEKEPSVLPSRFPNLLVNGSAGIAVGMATN
IPPHNLTEVINGVIMIIDNPDITISELMTSIKGPDFPTAGIIIGTSGIRSAYETGRGKIL
VRAKAEIEEVKGRNRIIITEIPYQVNKSKLIENMADLVKNKKIDGISDIRDESDRDGMRI
VIELKRDANPNVTLNQLYKHTRMQDTFGIIMISLVNNEPKVLNLKQMLVYYLQFQEEIVT
RRTKFDLDKAQARAHILEGLKIALDHIDEVIHLIRSSKTAENARNGLMSEFSLSEKQAQA
ILDMRLQRLTGLEREKIENEYNELMETIKHLKEILENKELLLKIIKDELIEIRDKYGDER
KTEIQISNDDINIEDLIEEQEVVITLTHSGYIKRISADTYSSQRRGGKGIQAMSTKEDDF
VEHIFITSTHNNILFFTNKGKVYKLKGYEIPDAGRTAKGTNLVNLIPLQGDEQIQAVISF
KEVDKDNYFIMATRCGLIKKTKISQYASIRKNGLNAINLKDEDELIGVRMTTGESEILIF
TKNGYAIRFSEDDVRPTGRNTTGVRAITLRTGDIAVAMDIVDKSQDVLVISENGFGKRTP
VSEYTIHRRGGKGIITYKVTEKTGLIVGARVVKDEDEMMLINSSNVAIRLNVSEISVTNR
NTMGVTLMRTDEEQRVVAIAKINCSDDTSDNTSNDIDDKKVEE

NT seq 2472 nt +upstreamnt +downstreamnt
atgtttgatgaaggaaaaattttaccagtagacataagccgtgaaatgaaaaaaagttat
atagactatgccatgagtgttattgtaagccgtgcacttccagatgtacgtgatggatta
aagccagttcacagaagaatactgtactctatgtatgagttaggacttactcctgaaaag
ggatataggaagtgtgcaagaattgtaggagatgttttaggtaaatatcatccacatgga
gatacagcagtttatgatgctctagttagattggcacaagacttctctattaggtatact
ctagttgatggtcatggaaattttggttcagtagatggagatagtgcggcagcaatgagg
tatactgaagctaaaatgaataagataacacttgaaatgctaaggggaataaataaaaat
acagtagatttcgttccaaactttgatggtgaagaaaaagaaccttcagttttaccttca
agatttcctaatttgcttgtaaatggttctgctggaatagcagtaggtatggctacaaat
ataccacctcataatcttactgaagttataaatggtgtcataatgataatagacaatcca
gatataacaattagtgagcttatgacatctataaaaggtcctgatttcccaactgcagga
ataataattggcacatcaggtataagaagtgcctatgaaactggaagaggaaaaatatta
gtaagggctaaagctgaaattgaagaagttaaaggtagaaacagaataataataactgaa
attccatatcaagttaataaatcaaagcttatagaaaatatggctgaccttgttaagaat
aaaaagatagatggaatatctgatattagagatgaatcagatagagatggaatgagaata
gttatagaattaaaaagagatgcaaatcctaatgtaactcttaatcagctgtacaaacat
acaaggatgcaggatacttttggaattataatgatttctcttgtaaataatgaacccaaa
gtactgaatttaaagcagatgcttgtatattatttacaatttcaagaagaaattgtaact
agaagaactaaattcgatttagacaaagctcaagctagagctcatattctagaaggatta
aaaatagcattagatcatatagatgaggtaatacatctaataagatcatctaaaactgca
gagaatgcaaggaatgggttaatgtctgaatttagtctttcagaaaaacaggctcaagct
atcttggatatgagacttcaaagacttacaggtcttgaaagagaaaaaattgaaaatgaa
tataatgaattgatggaaacaataaaacatctcaaggaaatactagaaaataaagaattg
ctgctgaagataattaaagatgaattaattgagataagagataaatatggtgatgaaaga
aaaactgaaatacagataagcaatgatgatataaatattgaagatcttattgaagagcag
gaagtagtaataacgctaactcattcaggatatataaaaagaatttctgctgatacctat
tcttcccaaagaagagggggaaagggaatacaagcaatgtctacaaaagaggatgacttt
gtagagcacatatttattacatcaacccataataatattttatttttcactaacaaaggt
aaagtatataaattaaagggttatgaaattcctgatgcgggtagaacggctaaaggaaca
aatttagttaatttaatacctctacaaggagacgaacaaattcaagcagttatatccttt
aaggaagttgataaggacaattattttatcatggctactagatgtggattgataaagaag
actaagataagtcaatatgcttctataagaaaaaatggattaaatgctataaatttaaaa
gatgaagatgaacttataggagttagaatgactacgggtgagagtgaaattcttattttc
actaaaaatggatatgctataagattcagtgaagatgatgtaagacctacgggaagaaat
acaacgggagtaagagccataactttaagaactggtgatatagctgtagctatggatatc
gtagataagtctcaagatgttctcgtaattagtgagaatggatttggtaaaagaactcca
gtatccgaatacactattcatagaagaggtggaaaaggaattatcacttacaaagttaca
gaaaaaaccggcttaatagttggtgctagagttgtaaaagatgaggatgaaatgatgctc
ataaatagcagtaatgtagctataaggctcaatgtatctgagatttctgttacaaataga
aatactatgggagttactcttatgagaacagatgaagaacaaagggttgttgcaattgct
aagataaattgcagtgatgatacaagtgataatacaagtaatgatatagatgataaaaaa
gtagaagaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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