KEGG   Clostridium ljungdahlii: CLJU_c42920
Entry
CLJU_c42920       CDS       T01276                                 
Symbol
trmE
Name
(GenBank) predicted tRNA modification GTPase
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
clj  Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:clj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clj03016]
    CLJU_c42920 (trmE)
Transfer RNA biogenesis [BR:clj03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CLJU_c42920 (trmE)
 Prokaryotic type
   Methyltransferases
    CLJU_c42920 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N AIG1 RsgA_GTPase Dynamin_N Roc Ras GTP_EFTU TniB Caudo_TAP AAA_22 AAA_16 AAA_24 NAD_binding_2 AAA_29
Other DBs
NCBI-ProteinID: ADK17293
UniProt: D8GJZ1
Position
complement(4625840..4627222)
AA seq 460 aa
MMKEFDTIAAVATVLGEGGISIIRISGCDSLKIVNSIFKGKSNKNLIDMKPYSMRYGYIV
EKSTGELLDEVLVSFMKSPKSYTSEDTVEINCHGGVVATKKVLEEVIKSGARIAEPGEFT
KRAFLNGRIDLSQAEAVIDIIRAKTELSMKSAVQQSTGKISKEINALREKLLEVIAHIEA
TVDYPEEDLEEMTSDKVSMRLQEILDEINHILSTAEEGKIVRDGLNTVIVGKPNVGKSSL
LNSLIRENRAIVTDVPGTTRDVIEEYMNIDGIPIKVIDTAGIRETEDLVEKIGVERSKQK
IDEADLVILMLDSSEELDDEDKEIMNYVKDKKYIILLNKIDINDKINLDDICNLDSSCII
KTSIKTGKGLDKIKTCIKDLFFKGEVKPGDLFITNARHKEGLIRAKESCIEALGALKNTS
AIDLASIDIRNAWDNLGKITGDTLEEDIIDKIFSQFCLGK
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgatgaaagagtttgatacaatagcagctgtagctacggttttaggtgaaggtggcata
tcgattataagaatttcaggctgtgattcacttaaaatagttaatagtatatttaaagga
aaaagtaataaaaatttgattgatatgaagccttattctatgagatatggttatatagta
gaaaaaagtactggtgaattactagatgaagtacttgttagttttatgaagtcccctaaa
agttatacttcagaagatacagttgaaataaattgtcacggtggagttgtggcaactaag
aaagtactcgaggaagttattaaatctggagctagaattgcagagccaggagagtttaca
aaaagggcatttttaaatggaaggatagatttaagtcaggcggaagcggtaattgatata
attagagcaaaaactgaactttcgatgaagtcagctgtacagcaatctactggtaagatt
tctaaagaaattaacgcacttagagaaaagcttttagaggtaattgcacatatagaggct
acagtggactatcctgaagaagacttagaagaaatgacatcagataaggtttccatgaga
ttacaggaaatattagacgaaataaatcatatattaagcactgcggaagaaggtaagata
gtcagagatggattgaatacagtaattgtaggaaaacctaatgtaggtaagtcctcactt
ttaaattctttaattagagaaaatagggcaatagttacagatgtaccaggtacaacaagg
gatgttatagaggaatatatgaatatagatggaattcctataaaggtaattgatactgca
gggataagggaaacggaggatttggtagaaaaaattggcgtagaaagatctaaacaaaag
atagatgaagctgatttagtcatattaatgctggattcaagtgaagaattggatgatgaa
gataaagagattatgaattatgtaaaagataaaaaatatataattctattaaataaaatt
gatataaatgataaaataaatttagacgatatttgtaatttagattccagttgtataata
aaaacttcaataaagacaggtaaaggattggataagataaaaacatgtattaaagacttg
ttttttaaaggtgaggttaaaccgggagatttatttataactaatgctagacataaggaa
ggacttataagagctaaggaaagttgtattgaagctttaggagcattaaagaatacatct
gctatagatttggcatctatagatataagaaatgcatgggataatcttggcaagataact
ggagacaccttagaagaagatataattgataaaatattttcacaattttgtttaggaaag
tag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

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