KEGG   Capnocytophaga leadbetteri: CGC53_07645
Entry
CGC53_07645       CDS       T05313                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
clk  Capnocytophaga leadbetteri
Brite
KEGG Orthology (KO) [BR:clk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clk02048]
    CGC53_07645
Prokaryotic defense system [BR:clk02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    CGC53_07645
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9-BH Cas9_a AmoC DUF5880
Other DBs
NCBI-ProteinID: ATA82219
UniProt: A0A250FAQ8
Position
1684268..1688650
AA seq 1460 aa
MKRILGLDLGSNSIGWAFVQQDFENKQGKIIAAGSRIIPMDQKMLSNFEEGTTVSQTAER
TTYRSMRRLRERHLLRRERLHRVLHILGFLPPHYDSQIDFSKRYGKFIDDAEPKIAYNNR
NFIFMDSFNEMIEDFRKHQPQLFYKKSNGEESKIPYDWTIYYLRKKALSQKITQQELAWL
ILHFNQKRGYYQLRGEEETEGNDMEIISSKVLSVIKKDKDKKYDKYWYDITLENGLVYKA
AFYNDLVYSWIDQKREFVVKRALLKNGDEKIELSYLPTFDEIAKMDKKQQDKFYQKIKVK
TESNIGNKTVGAYIYDHLLQNPNQKIKGKLVRTIERKYYKDELKAILAKQIALQPEFFTE
NLLADCIRELYRKNQTQQQKLLSKDFLHLFLEDIIFYQRPLRSKKSTIANCPLEKRSYID
KETNERKDVPIKVCAKSNPYYQEFRVLQWLQNLRIYEIETDREVTAEFIGTAQYYEALFN
FLMSQKEIDNESLLKYFLLTKNPQIKDKAAKSELKKWLTTYRWNYVYDAADNSSKKYPMN
ETGYELQRYLQKIEGLPVNFLTFDITYRLWHLLYSVKDKVEFEKALKKFAQKYQLEEASF
VDSFKDFKPYPNEYGSFSEKAIKKMLPLMRFGKHWNFKNIDVHTQKRIDDLINGVANEDI
RTIIREKAEKYQLNSETCFQGLPLWLAQYIVYNRYAEATNIEKWTSVSDLETYLEDFKQH
SLRNPIVEQVVTETLRVVRDIWQQYGGGQANFFDEIHIELGRELKNTSKERERLSKQNQE
NENTNLRIKKLLAELKEDANIQNVRPYSLVQQELLKIYEEGVFSSTDDIEEDIQKIRKKA
EPTNLEIQRYKLWLEQKYKSPYTGEVISLTKLFTEEYEIEHIIPQSRYYDDSLSNKVICE
SAVNKLKTNQLGLEFIQNHHGEKVRIAGNKEVTIFTEEQYKEFVKKYYANNLAKQQKLLL
NDIPEKMVARQLNDTRYISKYISEILSKIVRSDEKDEGVNSKNIIPCTGKITTALKQDWG
LNDIWNELILPRFERMNQLTQTQLFTSYNDRLQKNLPTVPIKYSQGFQKKRIDHRHHAMD
ALVIACATREHINYMNNQHALDKSKDKKEKQQSRIVLRTILCEKKNNNWQFKKPWSTFTQ
EAKEALEHIVVSFKQNLRVINKATNYYEKWEEKDGILVKKKVKQEGTNWAIRKPLHKETV
SGKIVLDKKIGKDKILTATRKTVDITFTEKVISSITDTGIQKILLNYLKYKGSPEVAFSA
EGLEELNKNIAQYNDGKKHQPIYKVRIFEEGSKFPLGETGAKVTKYVEAAKGTNLFFGVY
QGKEKRTYATIPLNEVIERQKQGLPSVPERNEKGEPLLFSLSPNDLVYVPMEGEAPEAID
FSNLSKEQKERIYKTVSFTGKECHFVKSTIASLIKSYDAKSKIGELGSLNKLEVTISGDS
RIKEVCIKLKVDRLGNITKA
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgaaacgtatattaggattagatttgggctcaaactctattggttgggctttcgtacaa
caagattttgaaaacaaacaaggaaaaattattgctgctggtagtaggattatccctatg
gatcagaaaatgttaagtaactttgaggaagggaccacagtttctcaaactgccgaaaga
actacttatcgcagtatgcgtcgcctgcgagaacggcatttacttcgccgtgagcgactt
catagagtacttcacatattaggatttttgcctcctcactacgattcacaaatagatttc
agcaaaagatatggtaagtttatagatgatgctgaacccaaaatagcttataacaatagg
aattttatttttatggatagttttaatgagatgattgaggatttcagaaaacatcaacct
cagttattctacaagaaatctaatggcgaagagagtaaaatcccctatgattggacaatt
tattaccttcgcaaaaaagcactctcacaaaaaattacccaacaagaattagcttggctt
atacttcacttcaatcaaaaaagagggtactaccagttgcgcggtgaagaagaaacagaa
ggaaatgacatggaaattatatcttctaaggtattatctgtgattaaaaaagataaagat
aaaaaatatgataagtattggtatgatataactttagagaatggtttagtgtataaagca
gctttttacaatgatttagtatatagttggattgatcaaaaaagagaatttgtagtaaaa
cgagctcttttaaaaaatggagatgaaaaaatagagctttcatatttacctacttttgat
gaaattgctaaaatggataaaaagcaacaagacaaattttatcaaaaaataaaagttaag
acagaaagtaatattggaaataaaacggtaggtgcttatatctatgatcatttattgcaa
aaccctaatcagaaaattaaagggaaattagttcgtactattgaaagaaagtactataaa
gatgaattaaaagctattttagctaaacaaatagcacttcaaccagaatttttcaccgaa
aacctattagcggactgtataagagaattataccgcaaaaaccagacgcaacagcaaaaa
ctattatcaaaagatttccttcatctgtttctagaagatattattttctaccaacgccca
ttgcgtagtaaaaaatctactattgccaattgtcccttagaaaagcgttcgtatatagat
aaggaaactaatgaacgcaaagatgttcctataaaagtatgtgccaaatctaatccttac
taccaagagtttagagtgctacaatggctacaaaacttgagaatttacgaaatagaaacc
gaccgtgaggtaacagctgagtttatcggaacagcccaatactatgaggctctcttcaac
ttcttgatgtctcaaaaagaaatagataatgaaagcttactgaaatactttttacttaca
aaaaatcctcaaattaaagacaaagcagctaaaagcgagctaaaaaaatggctcactact
tatcgctggaactatgtgtatgatgccgcggataactcctccaaaaaataccctatgaat
gaaacaggctatgaacttcagcggtatttgcagaaaatagaagggcttcccgtcaatttt
ctaacttttgatataacatatcgattgtggcatttgttatattcggtgaaggacaaagtt
gaatttgaaaaagcattaaagaaatttgctcaaaaatatcaattagaggaagcatcgttt
gtagatagtttcaaggacttcaaaccctatcctaatgaatatggtagtttttctgaaaaa
gcaattaaaaaaatgctccctctgatgcgttttggcaagcattggaatttcaagaatatt
gatgtacatactcaaaaacgtatagacgaccttattaatggagtggcaaatgaggatatc
cgtaccatcattagagaaaaagcagagaaatatcagctcaatagtgagacctgttttcaa
gggctacctctttggttggctcagtatatagtctataatcgttacgccgaagctactaat
atagaaaaatggacttcagtgagtgatttagaaacatatttagaagatttcaagcaacat
tcactgagaaatcctatagtggagcaagtagttaccgaaactttacgcgtagtaagagat
atttggcaacaatacggcggcggacaagctaatttctttgatgaaatacacatagagctc
ggcagagaacttaaaaatacttctaaggaaagagaaagactttctaaacaaaatcaggaa
aatgaaaataccaacctacgcattaaaaaattactcgctgaattaaaagaagatgcaaac
atacagaacgtgcgtccgtattcgcttgtacaacaagaactgcttaaaatttatgaagaa
ggtgtcttcagtagtacagatgatatagaggaagatattcagaaaattcgcaaaaaagct
gaacctaccaaccttgagatacaacgctataagctttggttagaacaaaagtataaatcg
ccctatacaggagaggtgatttcacttacaaaactattcacagaggagtatgaaatagaa
catattattccgcaaagccgttattacgacgatagtttatctaataaagtaatatgcgaa
tcagctgtaaataagctaaaaacaaatcaattaggattggaatttatccagaatcaccat
ggcgagaaagtgcgtatagcgggtaataaagaagttactatcttcacagaagagcagtac
aaagagtttgtgaagaaatactatgccaacaatttggctaaacagcaaaagctccttttg
aatgacatacctgaaaaaatggtggctcgtcagctgaatgacactcgttacatcagcaag
tatatttcagaaatactttctaaaatagtgcgttcagatgaaaaagatgagggcgtaaac
tctaaaaatataataccttgtacaggtaaaattactactgccctcaaacaagattgggga
cttaatgatatctggaacgagcttattcttcctcgttttgagcgaatgaaccagcttaca
caaacacagctatttacttcatataacgacagacttcaaaaaaatctccctactgttcca
ataaaatatagtcaaggtttccaaaagaaacgcatagaccaccgtcatcacgctatggat
gccttagtgattgcttgtgctaccagagagcatatcaattatatgaataaccagcatgca
ttggataagagtaaggataaaaaagaaaaacaacaatctcgcatagtccttcgcactatc
ctctgtgagaaaaagaataataactggcagttcaagaaaccttggagcactttcactcaa
gaagccaaagaagcccttgaacatatagtagtgagttttaaacaaaacttaagagtgatt
aataaggctaccaactattatgaaaaatgggaagagaaggatggtatacttgtaaaaaag
aaagtaaaacaagagggaactaattgggctattagaaagcctttacacaaagaaactgtt
tcaggtaaaattgttttggataaaaaaataggtaaagataaaatacttacagctacccga
aaaacagtagatattacctttacagaaaaagttatcagtagtattaccgatacgggtatt
cagaaaatattgcttaactatctcaaatataaagggagtccagaagtagctttttcagca
gaaggattagaagagctcaacaaaaatattgctcagtataacgatggtaagaaacatcaa
cctatttataaagtgcgtatttttgaagaaggaagtaaatttcctcttggagaaacagga
gctaaagttactaaatatgtagaagcagccaaaggaacgaacctcttttttggagtatat
caaggcaaagaaaaacgcacttatgcaactattcctctcaacgaagtaattgaacgacaa
aaacaaggactcccttctgtccccgagcgtaatgaaaaaggagaaccattgttgtttagc
ctttcgcctaacgatttagtatatgtacctatggaaggagaagccccagaggcaatagat
ttcagtaatctcagcaaagaacagaaagaaagaatttataaaacagtgagttttacagga
aaggaatgtcattttgtaaaatctactatagcttctctcataaaatcctatgatgctaaa
tctaagataggagaattaggaagtttgaataagttagaggttactattagtggagatagt
agaataaaagaagtctgtatcaaactgaaagtagaccgcctaggaaacattaccaaagca
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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